Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1005 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  242 bits (617), Expect = 6e-68
 Identities = 160/404 (39%), Positives = 229/404 (56%), Gaps = 28/404 (6%)

Query: 181 IEHKEELQKLVEIRTRELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDILR-G 239
           +EH E  + L       L LA++ AE AN++KS FLA MSHELRTPLN +LG++ +L  G
Sbjct: 608 LEHLERRRSL-----HRLSLAKEHAESANRAKSEFLANMSHELRTPLNGMLGMLQLLEAG 662

Query: 240 ELTSYQVELLEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQ 299
           +L   Q EL+    +S   LL +++DILDLSRIE+G   L       E+ + Q      Q
Sbjct: 663 DLDRDQNELVHIALDSGRTLLRVLSDILDLSRIEAGRMELRHDRFSPEEAVRQVYDMFAQ 722

Query: 300 IAQDKGVHFYVQSNKNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDV---VLDYTKD 356
            A+ +G+    + ++ P  E + D  RL QILFN++GNA+KFT +G V V    +  T++
Sbjct: 723 DARIRGLRLRWRCDELPC-EVWGDGTRLRQILFNLLGNAMKFTHEGTVGVEVCAVRRTEE 781

Query: 357 GV--VFRVKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQ 414
            V  +F V DTGIGI  +R+  +F PF Q D S TR Y GTGLGL I + LV LMGG + 
Sbjct: 782 SVRLLFSVSDTGIGIPHDRLMSIFEPFTQLDGSTTRRYSGTGLGLGIVRRLVHLMGGGLN 841

Query: 415 VESEFGIGTTFTLYIPLQ-----SRLKNIKPSTSSSQQIVNVKNHHILVVEDTKTNQMVI 469
           VES  G GT   + +P +         ++  ST + ++ + V     LV ED   N+M +
Sbjct: 842 VESALGEGTAVHVCLPFRLPSGGGVTCDVMDSTPALRRPLKV-----LVAEDEAVNRMTL 896

Query: 470 QLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILRDKHIE--- 526
              L+ LG++     NGL+AVE L +   FD VLMDI MP +DG+ A   +R +  E   
Sbjct: 897 SRCLHHLGHEAVCVTNGLEAVEALREGR-FDCVLMDIQMPELDGLEALARIRAEAGEQAR 955

Query: 527 --IPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKR 568
              P++ALTAH    D++  + AGM+  + KPI   ++  V+ R
Sbjct: 956 ALPPVVALTAHAMEGDRERFLAAGMSAYIPKPIELGELERVLLR 999