Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  208 bits (530), Expect = 6e-58
 Identities = 151/431 (35%), Positives = 239/431 (55%), Gaps = 23/431 (5%)

Query: 144 ISDSVLILLGQNKGQFSLEAKETLSRFRPLLERAISDIEHKEELQKLVEIRTRELRLAQK 203
           + ++ +   G+ +   +L+A   +    PLL     DI + + +++       EL  A+ 
Sbjct: 365 MQETYVAATGETRIVQTLKALVPMEGREPLLIGISWDITNFQNIEQ-------ELIKARI 417

Query: 204 LAEQANQSKSNFLAMMSHELRTPLNAVLGLIDILRGELTSYQVELLEQMEN-SAELLLII 262
            AEQ+++ K+ FLA MSHE+RTPLNA++G  ++L    T  + +L   + N ++E+LL +
Sbjct: 418 KAEQSDRLKTAFLANMSHEIRTPLNAIVGFSNLLPSAETLEEEKLYSSIINQNSEILLQL 477

Query: 263 INDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKNPTLEYYT 322
           INDILDLS+IE+G        ++L +        H+   Q+ GV   +  N++  L    
Sbjct: 478 INDILDLSKIEAGTLEYVRQPMNLGEICRNIYQIHKDRVQE-GVTL-ILDNQDEDLIIEE 535

Query: 323 DSARLTQILFNIVGNAIKFTKQGQVDVVLDYTKDGVVFRVKDTGIGIEKNRVEQLFTPFI 382
           D  R+ Q++ N + NA KFT  G++          + F VKDTGIGI  ++V  +F  F+
Sbjct: 536 DRNRIAQVITNFLTNAGKFTLSGEIRFGFKVNNQCIRFYVKDTGIGIAPDKVGHIFDRFV 595

Query: 383 QADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLYIPL-QSRLKNIKPS 441
           +  NS  +   GTGLGLAI + ++E +GG I V SE G G+TF   IP  +S    I  S
Sbjct: 596 KL-NSFAQ---GTGLGLAICRMIIEKIGGEIGVTSEIGKGSTFYFTIPYKESSDDRIAFS 651

Query: 442 TSSSQQIVN------VKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEK 495
            +S  + ++       K   ILV ED  +N ++I+ ++ K  Y +  A++G +AVE+  K
Sbjct: 652 EASETKYISHTIKRMQKIKKILVAEDVDSNFVLIKNMIGK-DYTLLWAKDGFEAVEMY-K 709

Query: 496 NHVFDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLK 555
               DL+LMDI MP M G+ AT+I+R    EIP+IALTA+   +DK+  ++AG ND V K
Sbjct: 710 QFQPDLILMDIKMPRMGGLEATRIIRSYSKEIPVIALTAYAFEADKEQALEAGCNDFVTK 769

Query: 556 PIRSKDIMEVV 566
           P+    + E +
Sbjct: 770 PVSKAALEEAL 780