Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 908 a.a., two-component system sensor histidine kinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  209 bits (531), Expect = 5e-58
 Identities = 134/385 (34%), Positives = 221/385 (57%), Gaps = 16/385 (4%)

Query: 192 EIRTRELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDIL-RGELTSYQVELLE 250
           E   ++L+  +  AE +++ KS FLA MSHE+RTPLNA++G  +++   E  + + E + 
Sbjct: 530 EKMAQQLKELKDKAELSDRLKSAFLANMSHEIRTPLNAIVGFSELMVYSEDPAEKEEYMS 589

Query: 251 QMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYV 310
            ++++ ELLL +INDILDLS+IESG         +L K  ++     +    +  V F +
Sbjct: 590 IIQSNNELLLRLINDILDLSKIESGILERKRETFNLAKVCNELYTMIQPKITNPDVEFQM 649

Query: 311 QSNKNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDVVLDYTKDGVVFRVKDTGIGIE 370
             N  P    + D +RL Q+  N + NA+K TK G + +     ++G+   V+D+G+GI 
Sbjct: 650 D-NSGPDCWIFLDRSRLKQVWMNYLTNAVKCTKSGYIKMGYSIEREGIRIYVEDSGVGIP 708

Query: 371 KNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLYIP 430
           +   E++F  F Q  N   +   GTGLGLAI++ ++E  GG +   S  GIG+TF  +IP
Sbjct: 709 EELQERVFGRF-QKLNEFAQ---GTGLGLAISRAIIEGAGGEVGFTSTPGIGSTFWAWIP 764

Query: 431 LQ-SRLKNIKPSTSSSQQI------VNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIA 483
            + S  K   P+ S   Q       ++ K   IL+ ED ++N  ++Q +L    Y +T  
Sbjct: 765 CEISTQKEHTPTISLPLQHQLSLNEIDKKELKILIAEDNESNYSLVQHILKS--YHLTHV 822

Query: 484 ENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQN 543
           +NG +AV  + +   FDLVLMD+ MP+M G+ AT+ +R+ +  IPIIALTA+   +D+ +
Sbjct: 823 QNGAEAVNKVREEE-FDLVLMDMKMPVMGGLEATRKIREFNNRIPIIALTANAFDADRIS 881

Query: 544 CIDAGMNDIVLKPIRSKDIMEVVKR 568
            +DAG N+ + KP++   ++E+  +
Sbjct: 882 ALDAGCNEFLAKPLKKSQLLELFSK 906