Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1236 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  222 bits (565), Expect = 8e-62
 Identities = 142/379 (37%), Positives = 222/379 (58%), Gaps = 18/379 (4%)

Query: 201  AQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDIL-RGELTSYQVELLEQMENSAELL 259
            A++ AE AN  KS FLA MSHE+RTP+NA++G++ +  R  LT+ Q + LE+   SA+ L
Sbjct: 711  AKQDAELANLYKSEFLANMSHEIRTPMNAIIGMLQLAQRTSLTAQQKDYLEKAGFSAQSL 770

Query: 260  LIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKNPTLE 319
            L IINDILD S+IE+G   L      L+K LD +L  +   AQ++GV   + +     L 
Sbjct: 771  LRIINDILDFSKIEAGKLELERVPFPLDKVLDHALDLNALKAQEQGVELLLYAPVTAGLI 830

Query: 320  YYTDSARLTQILFNIVGNAIKFTKQGQVDVVLDYTKDG-----VVFRVKDTGIGIEKNRV 374
               D  RL Q+L N++ NA+KFT+ G++++  +   +      + F V+DTGIGI K++ 
Sbjct: 831  LKGDPLRLGQVLINLLSNAVKFTQSGEIELGCEDVGERDHRITLKFWVRDTGIGISKDQQ 890

Query: 375  EQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLYIPLQ-S 433
            E+LF  F QAD S TR YGGTGLGL+I+KHLV +MGG +QV+SE G+G+TF+  I  + +
Sbjct: 891  EKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQVQSELGVGSTFSFTISFEIA 950

Query: 434  RLKNIKPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL 493
                ++P     +    + N   LVV+D  T   +   L+    ++V  A +G +A+  L
Sbjct: 951  EEAKVEPLVVPEK----LNNLRTLVVDDNPTALQIYSALMRDFHFEVDTAASGAEALYKL 1006

Query: 494  EKNHVFDLVLMDISMPIMDG---IAA--TKILRDKHIEIPIIALTAHTAGSDKQNCID-A 547
             ++ + DL+L+D  MP MDG   I+A  T +   +  + PII +    A    Q+ +D A
Sbjct: 1007 SRDPI-DLLLLDWMMPEMDGGDVISAIDTMVAEGRIAKRPIIIMMTAYAAEPLQHEVDSA 1065

Query: 548  GMNDIVLKPIRSKDIMEVV 566
             +  ++ KP ++  + + +
Sbjct: 1066 NVFAVLQKPFKASSLFDEI 1084



 Score = 91.3 bits (225), Expect = 2e-22
 Identities = 47/117 (40%), Positives = 73/117 (62%), Gaps = 3/117 (2%)

Query: 456  ILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIA 515
            +L+VED   NQ V   LL   GY+V +A NG  A+++++ +  FD VLMDI MP+MDG+ 
Sbjct: 1114 VLLVEDNFINQQVATELLKSAGYEVVVAGNGQIALDIID-SRPFDAVLMDIQMPVMDGLT 1172

Query: 516  ATKILRDKHIE--IPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRFL 570
            A + LR++     +PIIA+TAH    D++  + AGMN  + KPI   ++ E +  ++
Sbjct: 1173 AARALRERFSADVLPIIAMTAHAMSGDREKSLAAGMNAHITKPIVLTELFETLSHWI 1229