Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Xanthomonas campestris pv. campestris strain 8004

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 92/464 (19%), Positives = 191/464 (41%), Gaps = 45/464 (9%)

Query: 21  FTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFAFGTSALFAT 80
           + L + +  I+G A+ V+I A+L+ P L F  P   ++++  +H   +IF     A    
Sbjct: 33  YLLFSFVMFIIGAAMSVVIRAELMQPGLQFVKPEF-FNQMTTVHALVMIFGGVMPAFVGL 91

Query: 81  SYYVVQRTCQTRLFGGPLVP-FTFWGWQAIIVSAAITL---------------PLGYTSG 124
           + +++           P +  ++FW   A      +TL               PL    G
Sbjct: 92  ANWMIPLQIGAPDMALPRMNNWSFWLLPAAFTLLLLTLFLPGGAPAAGWTLYPPLSLQGG 151

Query: 125 KEYAELEWPIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVAN-------WFFGAFIITVAV 177
              A   + I +A  +  +  A+    T++  +   I +         W   AF++   +
Sbjct: 152 YNVAFSVFAIHVAGVSS-IMGAINIIATVLNMRAPGIDLLKMPIFCWAWLITAFLLIAVM 210

Query: 178 LHIVNSMALPVS---MGKSYSIYAGAVDAMVQ----WWYGHNAVGFLLTAGFLGMMYYFV 230
             +  ++ + ++    G S+   AG  D ++     W++GH  V  ++   F G++   +
Sbjct: 211 PVLAGAVTMLLTDKFFGTSFFNAAGGGDPVMYQHIFWFFGHPEVYIMILPAF-GVVSEII 269

Query: 231 PKQAERPVYSYRLSI--VHFWALISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSW 288
           P  + +P++ Y+  +  +   A +S  +WA  HH+    +P   +   M  ++++  P+ 
Sbjct: 270 PTFSRKPLFGYQAMVYAIAAIAFLSFIVWA--HHMFTVGMPLGGEIYFMFATMLISIPTG 327

Query: 289 GGMINGIMTLSGAWH-KLRYDPILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTI 347
             + N + T+   W   L ++  + + +  +  + +  F G M++I   +   H T + +
Sbjct: 328 VKVFNWVSTM---WKGSLTFESPMLWAVAFVILFSIGGFSGLMLAIVPADFQYHDTYFVV 384

Query: 348 GHVHSGALGWVAMVSIGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISG 407
            H H   +       I +VY+  P+  G  RMY+ +    HFW   I   L        G
Sbjct: 385 AHFHYVLVTGAVFALIAAVYYWWPKWTG--RMYNEAWAKFHFWWTMIFVNLLFFPQHFLG 442

Query: 408 VMQGLMWRAVNSDGTLT-YSFVESVQASYPFYTVRFIGGFIFLS 450
            + G+  R  + +     ++ + S+ A   F T   + G +F S
Sbjct: 443 -LAGMPRRIPDYNVVFADWNLISSIGAFGMFATPFLMAGILFAS 485