Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., cytochrome c oxidase subunit I from Synechocystis sp000284455 PCC 6803

 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 100/421 (23%), Positives = 177/421 (42%), Gaps = 40/421 (9%)

Query: 20  QFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFAFGTSALFA 79
           Q+ + + L+  +G +    +  +L  P  +F  P + Y++L  LH   +IF +   A  A
Sbjct: 33  QYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEM-YNQLMTLHGTIMIFLWIVPAGAA 91

Query: 80  TSYYVVQRTCQTRLFGGP-LVPFTFW----GWQAIIVSAAITLP---------LGYTSGK 125
            + Y++     T     P L    FW    G   +I S  +  P         L   SGK
Sbjct: 92  FANYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFVGAPQAGWTSYPPLSLLSGK 151

Query: 126 EYAELEWPIDIAIAAVW-VAYAVVFFGTLVKR--KTSHIYVANWFFGAFIITVAVLHIVN 182
              EL W + + +     +  A+ F  T++K   K   ++    F  A + T +++ +  
Sbjct: 152 WGEEL-WILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLST 210

Query: 183 SMALPVSMGKSYSIYAGAV--------DAMVQ----WWYGHNAVGFLLTAGFLGMMYYFV 230
            +     +  S+ + AG          D +V     W+Y H AV +++   F G++   +
Sbjct: 211 PVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAV-YIMILPFFGVISEVI 269

Query: 231 PKQAERPVYSYRLSIVHFWAL--ISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSW 288
           P  A +P++ YR       A+  + L +WA  HH+  +  P W +   M  ++++  P+ 
Sbjct: 270 PVHARKPIFGYRAIAYSSLAISFLGLIVWA--HHMFTSGTPGWLRMFFMATTMLIAVPTG 327

Query: 289 GGMINGIMTLSGAWHKLRYDPILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIG 348
             + +   TL G   K++ +  + F    LS + +    G M++    +   H T + +G
Sbjct: 328 IKIFSWCGTLWGG--KIQLNSAMLFAFGFLSSFMIGGLTGVMVASVPFDIHVHDTYFVVG 385

Query: 349 HVHSGALGWVAMVSIGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGV 408
           H H    G  A      VYH  P++ G  RM +  L   HF L  IG  L  + M   G+
Sbjct: 386 HFHYVLFGGSAFALFSGVYHWFPKMTG--RMVNEPLGRLHFILTFIGMNLTFMPMHELGL 443

Query: 409 M 409
           M
Sbjct: 444 M 444



 Score = 28.9 bits (63), Expect = 5e-04
 Identities = 15/55 (27%), Positives = 22/55 (40%)

Query: 357 WVAMVSIGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQG 411
           W+         +LIP + G E M    L    FWL   G +L I + ++     G
Sbjct: 84  WIVPAGAAFANYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFVGAPQAG 138