Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Cytochrome-c oxidase from Synechococcus elongatus PCC 7942

 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 95/441 (21%), Positives = 188/441 (42%), Gaps = 58/441 (13%)

Query: 20  QFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFAFGTSA-LF 78
           Q+ ++T ++ ++G A+   +  +L  P ++  +  L Y++L  +H   +IF +   A   
Sbjct: 37  QYLVLTFIFYLIGGALATAVRLELATPTVDVVSRDL-YNQLFTVHATVMIFLWIVPAGSG 95

Query: 79  ATSYYVVQRTCQTRLFGGP-LVPFTFWGWQAIIVSAAITL-----------------PLG 120
           A   Y++      R    P L    FW    ++  A I L                 PL 
Sbjct: 96  AFGNYLIPLLIGARDMAFPKLNAVAFW----LLPPAGILLIASFLVEAPSSGWTSYPPLS 151

Query: 121 YTSGKEYAELEWPIDIAIAAVW-VAYAVVFFGTLVKRKTSHIYVANW----FFGAFIITV 175
             SGK   E+ W + + +     +  A+ F  T++K +   +    W     F   +++ 
Sbjct: 152 LMSGKT-GEMIWILSVLLLGTSSILGAINFATTIIKMRRPGL---GWNQMPLFCWAMLST 207

Query: 176 AVLHIVNS---------MALPVSMGKSYSIYAGAVDAMVQ----WWYGHNAVGFLLTAGF 222
           +++ I+++         ++  + +G ++    G  + +V     W+Y H AV  ++   F
Sbjct: 208 SIMAILSTPVLAGALILLSFDLMVGTNFFNPLGGGNPVVYQHLFWFYSHPAVYIMILPVF 267

Query: 223 LGMMYYFVPKQAERPVYSYRLSIVHFWAL--ISLYIWAGPHHLHYTALPDWTQSLGMVMS 280
            GM+   +P  A +P++ Y+       A+  +SL +WA  HH+  +  P W +   M+ +
Sbjct: 268 -GMISEILPVHARKPIFGYQAIAYSSLAITFLSLIVWA--HHMFTSGTPPWLRMFFMIAT 324

Query: 281 LVLFAPSWGGMINGIMTLSGAWHKLRYDPILRFLIVSLSFYGMSTFEGPMMSIKTVNALS 340
           +++  P+   + + + TL G   KL+    L F +  +S + +    G M++   V+   
Sbjct: 325 MIIAVPTGIKVFSWLATLWGG--KLQLTSALLFSVGFISMFVIGGLSGIMLASVPVDIHV 382

Query: 341 HYTDWTIGHVHSGALGWVAMVSIGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYI 400
           H T + + H H    G         +YH  P++ G  R+ +      HF L  +G  L  
Sbjct: 383 HDTYFVVAHFHYVLFGGSVFGLYAGIYHWFPKMTG--RLLNEGWGKVHFILTLVGFNLCF 440

Query: 401 VAM-WISGVMQGLMWRAVNSD 420
           + M W+   +QG+  R    D
Sbjct: 441 LPMHWLG--LQGMPRRVAEYD 459