Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., cytochrome-c oxidase (RefSeq) from Shewanella amazonensis SB2B

 Score = 75.5 bits (184), Expect = 4e-18
 Identities = 71/309 (22%), Positives = 139/309 (44%), Gaps = 35/309 (11%)

Query: 161 IYVANWFFGAFIITVAVLHIVNSMALPVS----MGKSYSIYAGAVDAM----VQWWYGHN 212
           ++V  W   AF++ +AV+ ++  +   V      G S+   AG  D +    + W++GH 
Sbjct: 202 LFVWTWLITAFLL-IAVMPVLAGVVTMVLTDKYFGTSFFDAAGGGDPVMFQHIFWFFGHP 260

Query: 213 AVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWA---LISLYIWAGPHHLHYTALP 269
            V  ++   F G++   VP  + + ++ Y  S+V+  A   ++S  +WA  HH+  T +P
Sbjct: 261 EVYIMILPSF-GIISAIVPAFSRKKLFGYA-SMVYATASIAILSFLVWA--HHMFTTGMP 316

Query: 270 DWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWH-KLRYDPILRFLIVSLSFYGMSTFEG 328
            + +   M  ++++  P+   + N + T+   W   + ++  + F I  +  + +  F G
Sbjct: 317 VFAELFFMYCTMLIAVPTGVKVFNWVATM---WRGSMTFETPMLFAIAFIILFTIGGFSG 373

Query: 329 PMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPRLFGQERMYSVSLINAH 388
            M++I  V+   H T + + H H   +       + + Y+ +P+  G   MY   L   H
Sbjct: 374 LMLAITPVDFQYHDTYFVVAHFHYVLVSGAIFSIMAAAYYWLPKWTG--HMYDEKLGKLH 431

Query: 389 FWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGTLTYSFVESVQASYPFYTVRFIGGFIF 448
           FW + I   +    M   G + G+  R    D  + ++ V  + +         IGGF F
Sbjct: 432 FWCSVISVNVLFFPMHFLG-LAGMPRRI--PDYAIQFADVNQIVS---------IGGFAF 479

Query: 449 -LSGMFLMA 456
            LS +  +A
Sbjct: 480 GLSQLIFLA 488