Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., cytochrome-c oxidase, cbb3-type subunit I from Rhodopseudomonas palustris CGA009

 Score =  603 bits (1554), Expect = e-177
 Identities = 287/478 (60%), Positives = 357/478 (74%), Gaps = 6/478 (1%)

Query: 5   QEKQLEQNYNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLH 64
           QE     NYN   ++  + + + WGI G + G+ IA +L +P LN    W+ + RLRPLH
Sbjct: 71  QEINGAPNYNLGPIKFLSFMAMFWGIAGFSAGLYIALELAYPGLNI-AQWVNFGRLRPLH 129

Query: 65  TNAVIFAFGTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSG 124
           T+AVIFAFG + L ATS+YVVQ+T + RL G     F   G+   IV A     LG T  
Sbjct: 130 TSAVIFAFGGNVLLATSFYVVQKTTRARLAGDLAPWFVAIGYNFFIVIAGTGYLLGVTQS 189

Query: 125 KEYAELEWPIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSM 184
           KEYAE EW  D+ +  VWV Y +VF  TL+KRK  HIYVANWF+ AFIIT+AVLH+ N+ 
Sbjct: 190 KEYAEPEWYADLWLTIVWVTYLLVFLATLMKRKEPHIYVANWFYLAFIITIAVLHLGNNP 249

Query: 185 ALPVSM--GKSYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYR 242
            LPVS    KSY  ++G  DAM QWWYGHNAVGF LTAGFL +MYYF+PK+AERPVYSYR
Sbjct: 250 TLPVSFLGSKSYIAWSGVQDAMFQWWYGHNAVGFFLTAGFLAIMYYFIPKRAERPVYSYR 309

Query: 243 LSIVHFWALISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAW 302
           LSI+HFWALI LYIWAGPHHLHYTALPDWTQ+LGM  S++L+ PSWGGMING+MTLSGAW
Sbjct: 310 LSIIHFWALIFLYIWAGPHHLHYTALPDWTQTLGMTFSIMLWMPSWGGMINGLMTLSGAW 369

Query: 303 HKLRYDPILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVS 362
            KLR DP+LR ++VS++FYGMSTFEGPMM+IK VN+LSHYTDWTIGHVHSGALGWV  VS
Sbjct: 370 DKLRTDPVLRMMVVSVAFYGMSTFEGPMMAIKAVNSLSHYTDWTIGHVHSGALGWVGFVS 429

Query: 363 IGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGT 422
            G++Y L+P ++G++++YS+ L+N HFW+AT+G VLYI AMW+SG++QGLMWRA  S G 
Sbjct: 430 FGALYCLVPWVWGRKQLYSIRLVNWHFWIATLGIVLYISAMWVSGILQGLMWRAYTSLGF 489

Query: 423 LTYSFVESVQASYPFYTVRFIGGFIFLSGMFLMAYNAYKTISAPKNS---LKAIVQPA 477
           L YSF+ESV+A +PFY +R  GG +FL G  +MAYN + T+   + S    +  +QPA
Sbjct: 490 LEYSFIESVEAMHPFYAIRAAGGGLFLIGALIMAYNLWMTVRVGERSEAQPRVALQPA 547