Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., cytochrome c oxidase subunit 1 from Phaeobacter inhibens DSM 17395

 Score =  620 bits (1600), Expect = 0.0
 Identities = 289/461 (62%), Positives = 360/461 (78%), Gaps = 8/461 (1%)

Query: 9   LEQNYNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWL----TYSRLRPLH 64
           L+  Y  +VVR   + T  WG+VG  VGV IA QL +P LNF+  W      + RLRPLH
Sbjct: 61  LQGEYFDSVVRAGVVATAFWGVVGFLVGVFIAFQLAFPVLNFE--WAQGLANFGRLRPLH 118

Query: 65  TNAVIFAFGTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSG 124
           T+AVIFAFG +AL ATS+YVVQRT   RL+GG L  F FWG+Q  IV AA     G T  
Sbjct: 119 TSAVIFAFGGNALIATSFYVVQRTSAARLWGGNLAWFVFWGYQLFIVLAATGYLFGSTQS 178

Query: 125 KEYAELEWPIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSM 184
           KEYAE EW +D+ +  VWVAY  VF GT++KRK  HIYVANWF+ AFI+TVA+LH+VN+M
Sbjct: 179 KEYAEPEWHVDLWLTIVWVAYLAVFLGTVIKRKEPHIYVANWFYLAFIVTVAMLHLVNNM 238

Query: 185 ALPVSM--GKSYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYR 242
            +PVS+   KS  +++G  DAMVQWWYGHNAVGF LTAGFLGMMYYFVPKQAERPV+SY+
Sbjct: 239 TIPVSIWGSKSVIMWSGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVFSYK 298

Query: 243 LSIVHFWALISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAW 302
           LSI+HFWALI LYIWAGPHHLHYTALPDW  +LGMV S+VL+ PSWGGMING+MTLSGAW
Sbjct: 299 LSIIHFWALIFLYIWAGPHHLHYTALPDWASTLGMVFSIVLWMPSWGGMINGLMTLSGAW 358

Query: 303 HKLRYDPILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVS 362
            KLR DP++R +++S+ FYGMSTFEGPMMSI+ VN+LSHYTDWTIGHVHSGALGW  M++
Sbjct: 359 DKLRTDPVIRMMVISIGFYGMSTFEGPMMSIRAVNSLSHYTDWTIGHVHSGALGWNGMIT 418

Query: 363 IGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGT 422
            G++Y L+P L+ +ER+YS+SL++ HFWLATIG +LY  +MW++G+M+GLMWR V+++G 
Sbjct: 419 FGALYFLVPVLWKRERLYSLSLVSWHFWLATIGIILYAASMWVTGIMEGLMWREVDANGF 478

Query: 423 LTYSFVESVQASYPFYTVRFIGGFIFLSGMFLMAYNAYKTI 463
           L  SF ++V A +P Y VR +GG +FL+G  +M YN + T+
Sbjct: 479 LVNSFADTVAAKFPMYVVRALGGVMFLAGALIMCYNLWMTV 519