Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., cytochrome c oxidase, subunit I (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 77.0 bits (188), Expect = 1e-18
 Identities = 101/500 (20%), Positives = 199/500 (39%), Gaps = 76/500 (15%)

Query: 4   SQEKQLEQNYNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPL 63
           +  K++   Y Y +V  F        +VG+ +G LI  +L+ P         TY+ L  L
Sbjct: 29  TDHKRIGMLYLYCIVAMF--------LVGLTLGFLIRLELIAPGRTI-MGQQTYNALFTL 79

Query: 64  HTNAVIFAF---GTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLG 120
           H   +IF        A F   +  +Q   +   F   L  F++W    + V+ A+   + 
Sbjct: 80  HGVVMIFLVVIPSIPAAFGNIFLPIQIGAEDVSFPR-LNIFSWW----LYVTGAVLAVVS 134

Query: 121 YTSGKEYAELEWP------------IDIAIAAVWVA------YAVVFFGTLVKRKTS--- 159
             +GK   +  W             +D+A+ AV++         + F  TL + +     
Sbjct: 135 LVTGKGAPDTGWTFYVPFSAVTTTNVDVAVVAVFILGFSSILTGLNFITTLHRLRAPGMT 194

Query: 160 ---------HIYVANWF--FGAFIITVAVLHIVNSMALPVSMGKSYSIYAGAVDAMVQ-- 206
                     +Y   W       ++ + VL I     L V +   +    G    + Q  
Sbjct: 195 WTRLPLFCWSLYATGWIQVLATPVLGITVLLIFVERVLGVGL---FDPSRGGDPILYQHL 251

Query: 207 -WWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWAL--ISLYIWAGPHHL 263
            W Y H AV +++    +G++   +P  A +P++ Y++      A+      +WA  HH+
Sbjct: 252 FWIYSHPAV-YIMILPAMGVISEILPVFARKPIFGYKMIAFSSLAIAFAGSLVWA--HHM 308

Query: 264 HYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWHKLRYDPILRFLIVSLSFYGM 323
             + + D    +   ++ V+  PS   + N + TL      +R +P L + +  +  + +
Sbjct: 309 FVSGMSDTAVMVFSFLTFVVAIPSAIKVFNWVSTLYKG--SIRVEPPLWYALAFIFLFSI 366

Query: 324 STFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPRLFGQERMYSVS 383
               G ++     +   H T + + H H    G +     G++++  P+++G  RMY   
Sbjct: 367 GGLTGLVLGAAGTDVHVHDTYFVVAHFHYVIFGGLGFGLFGAMHYWFPKVYG--RMYDKR 424

Query: 384 LINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGTLTYSFVESVQASYPFYTVRFI 443
           + N    +A +G  +    M+I G +QG+  R         Y ++      +   T   +
Sbjct: 425 IANWSCLVAFVGFNILYFPMFILG-LQGMPRR--------YYDYLPKYAEGHFIST---M 472

Query: 444 GGFIFLSGMFLMAYNAYKTI 463
           G ++  +G+ LM +N ++ I
Sbjct: 473 GSWVLATGLLLMFWNLWRGI 492