Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., cytochrome c oxidase, cbb3-type, subunit I (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  609 bits (1571), Expect = e-179
 Identities = 283/471 (60%), Positives = 359/471 (76%), Gaps = 6/471 (1%)

Query: 13  YNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTP--WLTYSRLRPLHTNAVIF 70
           Y   VVR   + T  WG+VG   G  IA QL +PQLNF     +  + RLRPLHT+AVIF
Sbjct: 62  YMDDVVRYGVVATAFWGVVGFLAGTFIAFQLAYPQLNFAWAEGYANFGRLRPLHTSAVIF 121

Query: 71  AFGTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSGKEYAEL 130
           AFG +AL  TS+Y+VQRT   RL+GG L  F FWG+   IV AA    LG T  KEYAE 
Sbjct: 122 AFGGNALICTSFYIVQRTSAARLWGGNLAWFVFWGYNLFIVLAATGYLLGATQSKEYAEP 181

Query: 131 EWPIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSMALPVSM 190
           EW +DI +  VWVAY  VF GT++ RK  HIYVANWF  +FI+TVA+LH+ N++++PVS+
Sbjct: 182 EWYVDIWLTVVWVAYLAVFLGTIMNRKEKHIYVANWFLLSFIVTVAMLHLGNNLSIPVSI 241

Query: 191 --GKSYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHF 248
              +S  +++G  DAM+QWWYGHNAVGF LTAGFLGMMYYFVPKQAERPV+SY+LSI+HF
Sbjct: 242 FGSRSVQLFSGVQDAMMQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVFSYKLSIIHF 301

Query: 249 WALISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWHKLRYD 308
           WALI LYIWAGPHHLHYTALPDW  +LGMV S+VL+ PSWGGMING+MTLSGAW KLR D
Sbjct: 302 WALIFLYIWAGPHHLHYTALPDWASTLGMVFSIVLWMPSWGGMINGLMTLSGAWDKLRTD 361

Query: 309 PILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYH 368
           P++R +++S+ FYGMSTFEGPMMSI+ VN+LSHYTDWTIGHVHSGALGW  M++ G++Y 
Sbjct: 362 PVIRMMVISIGFYGMSTFEGPMMSIRAVNSLSHYTDWTIGHVHSGALGWNGMITFGALYF 421

Query: 369 LIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGTLTYSFV 428
           L+PRL+ +E++YS++L++ HFWLATIG VLY  AMW++G+M+GLMWR V++ G L  SF 
Sbjct: 422 LVPRLWNREKLYSLTLVSWHFWLATIGIVLYASAMWVTGIMEGLMWREVDAQGFLVNSFA 481

Query: 429 ESVQASYPFYTVRFIGGFIFLSGMFLMAYNAYKTIS--APKNSLKAIVQPA 477
           ++V A +P Y VR +GG ++L+G  +M  N + T++  + K S  A+  PA
Sbjct: 482 DTVSAKFPMYVVRGLGGVLYLAGAIIMCLNLWWTVTRGSEKKSPAAVATPA 532