Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., cytochrome c oxidase, subunit I (RefSeq) from Shewanella sp. ANA-3

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 56/259 (21%), Positives = 118/259 (45%), Gaps = 20/259 (7%)

Query: 161 IYVANWFFGAFIITVAVLHIVNSMALPVS---MGKSYSIYAGAVDAM----VQWWYGHNA 213
           ++V  W   AF++   +  +  ++ + ++    G S+   AG  D +    + W++GH  
Sbjct: 201 LFVWTWLITAFLLIAVMPVLAGAVTMVLTDKFFGTSFFEAAGGGDPVMFQHIFWFFGHPE 260

Query: 214 VGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWA---LISLYIWAGPHHLHYTALPD 270
           V  ++   F G++   VP  + + ++ Y  S+V+  A   ++S  +WA  HH+  T +P 
Sbjct: 261 VYIMILPSF-GIISAIVPAFSRKKLFGYS-SMVYATASIAILSFLVWA--HHMFTTGMPV 316

Query: 271 WTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWH-KLRYDPILRFLIVSLSFYGMSTFEGP 329
           + +   M  ++++  P+   + N + T+   W   L ++  + F +  +  + +  F G 
Sbjct: 317 FAELFFMYCTMLIAVPTGVKVFNWVATM---WRGSLSFETPMLFAVAFIILFTIGGFSGL 373

Query: 330 MMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPRLFGQERMYSVSLINAHF 389
           M++I   +   H T + + H H   +       + + Y+ +P+  G   MYS  L   HF
Sbjct: 374 MLAITPADFQYHDTYFVVAHFHYVLVTGAIFSIMAAAYYWLPKWTG--HMYSEKLGQWHF 431

Query: 390 WLATIGTVLYIVAMWISGV 408
           W + I   +    M   G+
Sbjct: 432 WCSVISVNVLFFPMHFLGL 450