Pairwise Alignments

Query, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., cytochrome c oxidase, cbb3-type, subunit I (RefSeq) from Shewanella sp. ANA-3

 Score =  853 bits (2204), Expect = 0.0
 Identities = 399/473 (84%), Positives = 437/473 (92%)

Query: 3   MSQEKQLEQNYNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRP 62
           M+  +    +YNYT+VRQF L T+LWGIVGM+VGVLIAAQL+WP LNFDTPW TYSRLRP
Sbjct: 2   MNHSQPTGADYNYTIVRQFALTTVLWGIVGMSVGVLIAAQLIWPHLNFDTPWFTYSRLRP 61

Query: 63  LHTNAVIFAFGTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYT 122
           LHTNAVIFAFGTSALFATSYYVVQRTCQTRLF   L  FTFWGWQAII+SAAITLP+GYT
Sbjct: 62  LHTNAVIFAFGTSALFATSYYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGYT 121

Query: 123 SGKEYAELEWPIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVN 182
           SGKEYAELEWPIDIAI  VWV+YA+VFFGT++KR TSHIYVANWFFGAFIITVAVLHIVN
Sbjct: 122 SGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHIYVANWFFGAFIITVAVLHIVN 181

Query: 183 SMALPVSMGKSYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYR 242
           SMA+PVS+ KSYS+Y+GAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQA RPVYSYR
Sbjct: 182 SMAVPVSLFKSYSMYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSYR 241

Query: 243 LSIVHFWALISLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAW 302
           LSIVHFWALI+LYIWAGPHHLHYTALPDWTQSLGMVMSL+LFAPSWGGMINGIMTLSGAW
Sbjct: 242 LSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGAW 301

Query: 303 HKLRYDPILRFLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVS 362
           HKLR DP+LRFL+VSLSFYGMSTFEGPMM+IKTVNALSHYTDWT+GHVHSGALGWVAMVS
Sbjct: 302 HKLRTDPVLRFLVVSLSFYGMSTFEGPMMAIKTVNALSHYTDWTVGHVHSGALGWVAMVS 361

Query: 363 IGSVYHLIPRLFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGT 422
           IGS+YHLIP LFG  RMYS+ L+N HFWLATIGTVLYIV+MWISGVMQGLMWRAVN+DGT
Sbjct: 362 IGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIVSMWISGVMQGLMWRAVNADGT 421

Query: 423 LTYSFVESVQASYPFYTVRFIGGFIFLSGMFLMAYNAYKTISAPKNSLKAIVQ 475
           LTYSFVES++ASYPFY VRF+GG  FL+GM +MAYN  +T+ A K+SL A+ +
Sbjct: 422 LTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAE 474