Pairwise Alignments

Query, 206 a.a., cytochrome-c oxidase, cbb3-type subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., cytochrome-c oxidase, cbb3-type subunit II from Rhodopseudomonas palustris CGA009

 Score =  217 bits (552), Expect = 2e-61
 Identities = 109/225 (48%), Positives = 142/225 (63%), Gaps = 31/225 (13%)

Query: 8   RHELLERNVGLLAIFIVFAISWGALVEITPLIFQKQTTEEVQNLKPYTALQLEGRDIYIR 67
           RH++ E N  +L + I+  I+ G LVEITPL + K T E+V  ++PYT L+L GR+IYIR
Sbjct: 6   RHKIFETNSVVLIVGILLVIAIGGLVEITPLFYLKSTIEKVDGVRPYTPLELAGRNIYIR 65

Query: 68  EGCNVCHSQMVRPFRSETERYGHYSVAGESVWEHPFLWGSKRTGPDLARVGGRYSDEWHR 127
           EGC +CHSQM+RP R E ERYGHYS+A ES+++HPF WGSKRTGPDLARVGG+YSD+WH 
Sbjct: 66  EGCYLCHSQMIRPLRDEIERYGHYSLAAESMYDHPFQWGSKRTGPDLARVGGKYSDDWHV 125

Query: 128 VHLLNPRELVPESNMPAFPWLAKNTLDGKYTQQKMTLFRDKFGVPYTDEQIANATKDVEG 187
            HL NPR +VP+S MP + +LA N +D       +   R   GVPY+DE IA A  D + 
Sbjct: 126 AHLKNPRSIVPQSVMPNYAFLADNKVDVASLSDHLKTNRT-LGVPYSDEDIAKAAADAKA 184

Query: 188 K------------------------------TEMDAIIAYLQSLG 202
           +                              TE+DA+++YLQ LG
Sbjct: 185 QVDPEGAAAADLQKRYPKAVVRNFDGQPGDPTELDALVSYLQMLG 229