Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  261 bits (668), Expect = 1e-74
 Identities = 142/332 (42%), Positives = 194/332 (58%), Gaps = 31/332 (9%)

Query: 1   MTTFWSLWIIVITVGTLLGCAILLVWCLKDKMGVEEGVDMGHEYDGIRELNNPLPKWWTY 60
           MTTFWS WI V+T+G+L+G   LL+   K +        MGH +DGI E +NPLP+WW  
Sbjct: 1   MTTFWSTWICVLTIGSLIGLTWLLIGTRKGETKGSVDQTMGHSFDGIEEYDNPLPQWWFL 60

Query: 61  LFIGTFIFAAIYLTLYPGLGSFKGILGWQSSDQTVRSLEESRASIAAAQQNKQLVQYSKE 120
           LF GT +F+  YL LYPGLG++KGIL    S  T                     ++ KE
Sbjct: 61  LFAGTLVFSVGYLVLYPGLGNWKGILPGYESGWTGAH------------------EWEKE 102

Query: 121 LDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDALKVGQRLFLQNCSQCHGSDARGQK 180
           +  A+A +G  F + A          + ++A D  ALK+G RLF  NCS CHGSDA+G  
Sbjct: 103 MAKADAKFGPIFAKFA-------AMPVEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAF 155

Query: 181 GFPNLTDDAWLYGGEPQAIVTTIRHGRIGQMPAWKDILGEQGVKEVVSYTL-SLSGRSVN 239
           GFPNL D  W +GG    I TTI  GR+  MPAW ++LG+ GVK V +Y    L+G  + 
Sbjct: 156 GFPNLADSNWRWGGAADTIKTTIMGGRMAAMPAWGEVLGDAGVKNVAAYVRHDLAGLPLP 215

Query: 240 A---KEAEAGKARF-AVCSACHGTDGKGNPAFGAPNLTD-NDWLFGDSRAEVTETVMNGR 294
           A    + +AG+  F   C ACHG +G+G  A GAPNLT    +++G S A++ +T+ +GR
Sbjct: 216 ADSGADLQAGQQAFNTTCVACHGANGQGTEAMGAPNLTQPAGFIYGTSLAQLQQTIRHGR 275

Query: 295 SGVMPAWINTLGEEKIQLVAAYVWSLSNSENK 326
            G MPA    LG +K+QL+AAYV+SLS ++ +
Sbjct: 276 QGHMPAQNELLGNDKVQLLAAYVYSLSKTDEQ 307