Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., FixP1 di-heme cytochrome c from Sinorhizobium meliloti 1021

 Score =  190 bits (482), Expect = 4e-53
 Identities = 112/298 (37%), Positives = 157/298 (52%), Gaps = 40/298 (13%)

Query: 41  GHEYDGIRELNNPLPKWWTYLFIGTFIFAAIYLTLYPG----LGSFKGILGWQSSDQTVR 96
           GHE+DGIRELNNP+P+WW Y F  T I+A  Y   YP       + KG+LG+ S  +   
Sbjct: 18  GHEWDGIRELNNPMPRWWVYSFYATIIWAIGYAIAYPSWPMLTEATKGMLGYSSRAEV-- 75

Query: 97  SLEESRASIAAAQQNKQLVQYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDA 156
           S+E + A  A A   +Q+   S E    E       ++ A             ++A + A
Sbjct: 76  SVELAAAKAAQAGNLEQIASSSVE----EIIANPQLQQFA-------------VSAGASA 118

Query: 157 LKVGQRLFLQNCSQCHGSDARGQKGFPNLTDDAWLYGGEPQAIVTTIRHG---------R 207
            KV       NC+QCHGS A G +GFPNL DD WL+GG+PQ I  TI HG         R
Sbjct: 119 FKV-------NCAQCHGSGAAGGQGFPNLNDDDWLWGGKPQEIYQTIAHGVRHAPDGETR 171

Query: 208 IGQMPAWKDILGEQGVKEVVSYTLSLSGRSVNAKEAEAGKARFAV-CSACHGTDGKGNPA 266
           + +MP + D+L  + +++  +Y +SL+         + GK  FA  C++CHG D KGN  
Sbjct: 172 VSEMPPFGDMLTPELMQQTAAYVVSLTQAPSQPHLVQQGKQVFADNCASCHGADAKGNRE 231

Query: 267 FGAPNLTDNDWLFGDSRAEVTETVMNGRSGVMPAWINTLGEEKIQLVAAYVWSLSNSE 324
            GAPNL D  WL G+    V   +   + GVMPAW+  LG++ ++ +A +V SL   E
Sbjct: 232 MGAPNLADAIWLKGEGEQAVITQMKTPKHGVMPAWLPRLGDDTVKQLAVFVHSLGGGE 289



 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 12/92 (13%)

Query: 245 AGKARFAV-CSACHGTDGKGNPAFGAPNLTDNDWLFGDSRAEVTETVMNG---------R 294
           AG + F V C+ CHG+   G   F  PNL D+DWL+G    E+ +T+ +G         R
Sbjct: 114 AGASAFKVNCAQCHGSGAAGGQGF--PNLNDDDWLWGGKPQEIYQTIAHGVRHAPDGETR 171

Query: 295 SGVMPAWINTLGEEKIQLVAAYVWSLSNSENK 326
              MP + + L  E +Q  AAYV SL+ + ++
Sbjct: 172 VSEMPPFGDMLTPELMQQTAAYVVSLTQAPSQ 203