Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., FixP3 Diheme c-type cytochrome from Sinorhizobium meliloti 1021

 Score =  154 bits (388), Expect = 3e-42
 Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 53/303 (17%)

Query: 41  GHEYDGIRELNNPLPKWWTYLFIGTFIFAAIYLTLYP----GLGSFKGILGWQSSDQTVR 96
           GHE++GI+EL+ P+P+      + T +FA ++  L P    G    KG+LG        R
Sbjct: 16  GHEWNGIKELDTPVPRGVLLFLVVTHVFALLWWVLLPTWPLGTTYTKGLLGIDE-----R 70

Query: 97  SLEESRASIAAAQQNKQLVQYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDA 156
           ++ E + + AAA               A A + +    L+Y+           I AD   
Sbjct: 71  NVVEEKLAAAAA---------------ARAVWEKRIDTLSYEQ----------IRADEQL 105

Query: 157 L----KVGQRLFLQNCSQCHGSDARGQKGFPNLTDDAWLYGGEPQAIVTTIRHG------ 206
           +      G +LF  NC+ CHG D +G+  +P+LTDD WL+GG P+ I  T+R G      
Sbjct: 106 MATVRSTGHQLFGDNCAVCHGIDGKGRSNYPDLTDDDWLWGGGPEDIEQTLRVGINTRHP 165

Query: 207 --RIGQMPAW--KDILGEQGVKEVVSYTLSLSGRSVNAKE----AEAGKARFAV-CSACH 257
             R+ QMP++  + +L    V++V +Y  SL+    +  E     EAG+  F   C+ACH
Sbjct: 166 ESRVAQMPSFGREQMLERNQVRDVAAYVYSLTNPGYSTPENIGRIEAGREVFLTSCAACH 225

Query: 258 GTDGKGNPAFGAPNLTDNDWLFGDSRAEVTETVMNGRSGVMPAWINTLGEEKIQLVAAYV 317
           G + +G+   GAPNLTD  W++G +   + E+V  GR G MP W   L   +I+++A Y+
Sbjct: 226 GENARGSREVGAPNLTDAYWIYGGTMQTIIESVHGGRQGHMPTWDERLTSAEIKILALYI 285

Query: 318 WSL 320
            SL
Sbjct: 286 NSL 288



 Score = 53.1 bits (126), Expect = 8e-12
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 12/80 (15%)

Query: 253 CSACHGTDGKGNPAFGAPNLTDNDWLFGDSRAEVTETVMNG--------RSGVMPAW--I 302
           C+ CHG DGKG   +  P+LTD+DWL+G    ++ +T+  G        R   MP++   
Sbjct: 121 CAVCHGIDGKGRSNY--PDLTDDDWLWGGGPEDIEQTLRVGINTRHPESRVAQMPSFGRE 178

Query: 303 NTLGEEKIQLVAAYVWSLSN 322
             L   +++ VAAYV+SL+N
Sbjct: 179 QMLERNQVRDVAAYVYSLTN 198