Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., cytochrome c oxidase, cbb3-type, subunit III (RefSeq) from Shewanella amazonensis SB2B

 Score =  320 bits (819), Expect = 4e-92
 Identities = 162/329 (49%), Positives = 216/329 (65%), Gaps = 14/329 (4%)

Query: 1   MTTFWSLWIIVITVGTLLGCAILLVWCLKDKM-GVEEGVDMGHEYDGIRELNNPLPKWWT 59
           M+ FWS+WI ++T+  ++GC +LL  C K+    ++EG  MGH +DGI ELNNPLPKWW+
Sbjct: 3   MSNFWSMWISILTILVIIGCFVLLRICSKNTTPDIKEGESMGHSFDGIEELNNPLPKWWS 62

Query: 60  YLFIGTFIFAAIYLTLYPGLGSFKGILGWQSSDQTVRSLE----ESRASIAAAQQNKQLV 115
           Y+F  T +F  IYL LYPGLG+FKG LGW SS+Q++ + +    +S+A+I  A +  + V
Sbjct: 63  YMFYITIVFGVIYLALYPGLGNFKGFLGWSSSNQSIGTEQGIKADSKAAIENAAKEGRWV 122

Query: 116 QYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDALKVGQRLFLQNCSQCHGSD 175
           QY  E+  A+  YG  FK  A     T L E   +  + +ALKVG RLFLQNC+QCHGSD
Sbjct: 123 QYDVEVKSADDKYGHIFKEYA----ATPLEE---LVKNPEALKVGGRLFLQNCAQCHGSD 175

Query: 176 ARGQKGFPNLTDDAWLYGGEPQAIVTTIRHGRIGQMPAWKDI-LGEQGVKEVVSYTLSLS 234
           ARG  GFPNLTD  WLYGG+   I  +I +GR G MP    + + +  +  +  Y +SLS
Sbjct: 176 ARGSTGFPNLTDADWLYGGDLATIKASIMNGRRGMMPPKGGLPIDDSEIPGLAEYVVSLS 235

Query: 235 GRSVNAKEAEAGKARFAV-CSACHGTDGKGNPAFGAPNLTDNDWLFGDSRAEVTETVMNG 293
           G   +A  A  G+  F   C ACHG D KGN   GAPNLTDN WL+G SR ++ E++  G
Sbjct: 236 GGEHDAALAAQGQGSFMKGCFACHGMDAKGNKFMGAPNLTDNVWLYGSSRGKIEESIKFG 295

Query: 294 RSGVMPAWINTLGEEKIQLVAAYVWSLSN 322
           R+GVMPAW + LGEEK+ ++ AYV+SLSN
Sbjct: 296 RAGVMPAWKDVLGEEKVHVITAYVYSLSN 324