Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., Cytochrome c oxidase cbb3-type, subunit III (NCBI) from Rhodospirillum rubrum S1H

 Score =  151 bits (382), Expect = 2e-41
 Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 49/304 (16%)

Query: 41  GHEYDGIRELNNPLPKWWTYLFIGTFIFAAIYLTLYP----GLGSFKGILGWQSSDQTVR 96
           GHE+DGI ELN PLP WW ++F  T ++A  Y+ +YP    G  +  G+ GW S  +  +
Sbjct: 17  GHEWDGITELNTPLPAWWVWVFYATIVWALAYVVVYPAIPLGASATPGLFGWHSRTELQK 76

Query: 97  SLEESRASIAAAQQNKQLVQYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDA 156
            + ++                       +A++ +   R+   D    + + P       A
Sbjct: 77  DMNQAY----------------------QAFHADKVARIESMDVDAIIADDP---LRQYA 111

Query: 157 LKVGQRLFLQNCSQCHGSDARGQKGFPNLTDDAWLYGGEPQAIVTTIRHG---------- 206
            + G+ +F +NC+ CH S   G  G+P L DD WL+GG   AI TT+RHG          
Sbjct: 112 TRAGEVIFKENCAPCHQSGGAGNYGYPTLADDEWLWGGTADAIYTTVRHGIRDTNTFDDT 171

Query: 207 RIGQMPAWKDILGEQGVKEVVSYTLSLSGRSVNAKEAEAGKARFAV-CSACHGTDGK--- 262
           R  +MP++ + L E+ +  +  Y ++ S  S+ A     G+  F   C+ CH ++     
Sbjct: 172 RFNEMPSFAE-LPEEDLNALADYVVAASAGSLPAGH---GQQLFEENCAVCHASESSGPV 227

Query: 263 --GNPAFGAPNLTDNDWLFGDSRAEVTETVMNGRSGVMPAWINTLGEEKIQLVAAYVWSL 320
             GN A GAP L +  WL+   +  +   +   + G+MP W N L +  I+    YV SL
Sbjct: 228 PDGNQAMGAPALNNQIWLYKGDKESILAQLRAPKQGMMPGWANRLKDSDIKSATVYVHSL 287

Query: 321 SNSE 324
              +
Sbjct: 288 GGGQ 291