Pairwise Alignments

Query, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., cytochrome c oxidase subunit 3 from Phaeobacter inhibens DSM 17395

 Score =  182 bits (461), Expect = 1e-50
 Identities = 110/300 (36%), Positives = 156/300 (52%), Gaps = 42/300 (14%)

Query: 41  GHEYDGIRELNNPLPKWWTYLFIGTFIFAAIYLTLYPGLGSFK----GILGWQSSDQTVR 96
           GH +DGI E +NP+P+WW + F  T I+A  Y   YP     +    G+LGW S      
Sbjct: 16  GHSWDGIEEFDNPMPRWWLWTFYATIIWAIGYTVAYPAWPGIQSATAGVLGWNS------ 69

Query: 97  SLEESRASIAAAQQNKQLVQYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDA 156
                RA +A         +    +++A A      + +     TT+    P++  +  A
Sbjct: 70  -----RALVA---------EEIAAVNEANAPINSRLEEIELASITTD----PEL--NGYA 109

Query: 157 LKVGQRLFLQNCSQCHGSDARGQKGFPNLTDDAWLYGGEPQAIVTTIRHG---------R 207
           +  G  +F   C+QCHG+ A G KG+PNL DD WL+GG  + I  TI HG         R
Sbjct: 110 VSAGSAVFKTWCAQCHGAGAAGAKGYPNLLDDDWLWGGSMEDIHATIAHGIRNEESDDAR 169

Query: 208 IGQMPAW--KDILGEQGVKEVVSYTLSLSGRSVNAKEAEAGKARFAV-CSACHGTDGKGN 264
             +MPA+   ++L ++ + +VV+Y +SLSG   +A +   G A FA  C++CH  DG G+
Sbjct: 170 YSEMPAFGRDELLEKEEIDQVVNYVMSLSGEPQDADKVAPGAAIFADNCASCHMEDGTGD 229

Query: 265 PAFGAPNLTDNDWLFGDSRAEVTETVMNGRSGVMPAWINTLGEEKIQLVAAYVWSLSNSE 324
            + GAPNL D  WL+G   A +TETV N R GVMP W   L E +I+ V AYV  L   E
Sbjct: 230 RSQGAPNLADAIWLYGGDHATLTETVYNSRYGVMPNWNARLTEAQIRAVTAYVHQLGGGE 289