Pairwise Alignments

Query, 790 a.a., copper-translocating P-type ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 799 a.a., cation transport ATPase, E1-E2 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  733 bits (1893), Expect = 0.0
 Identities = 379/793 (47%), Positives = 536/793 (67%), Gaps = 11/793 (1%)

Query: 4   TCYHCGEDVPAGTNFHVDILGEQRDMCCPGCQTVAQTIVDSGLVSYYQFRTAPAEK-VEL 62
           +C+HC E V  GT F   I      MCCPGCQ V+Q IVD+GL+SYY+FRT P  K   L
Sbjct: 5   SCFHCNEPVLTGTQFVTQINDRDELMCCPGCQAVSQAIVDAGLLSYYKFRTEPGNKQTAL 64

Query: 63  VPEQLKALIHYDNSDVQAEFVRSKDDHSEVTLSLDGVSCAACAWLIEKQLHTEPGVVSIR 122
           VPE L     YD  +VQ +FV S+D+   V+LS+DG++CAACAWLIE ++    GV  + 
Sbjct: 65  VPEALNQFSAYDLPEVQQDFVHSEDNSDSVSLSIDGITCAACAWLIEHKVKQLSGVRQVM 124

Query: 123 VNTTTNRALLSWDRTKTQLSHVLAQIHKLGYKAAPFEADKHEAQYHDAMKTYLYRLGIAG 182
           VN+TT RA++SWD+ + +LS +L QI ++GY+AAP++ D+ E       + +L RLG+AG
Sbjct: 125 VNSTTQRAMISWDKQQVKLSDILGQISRIGYQAAPYQVDEQELTTKQNSRKFLLRLGLAG 184

Query: 183 LASMQVMMLAVALYLEAFGDLDAEFKNYFRWVSLIFATPVLLYSALPFYLNAWRSIRGRT 242
            A+MQVMM A+ALY   F DLD ++++YFRWVS+IFATPV+LYSA PFY +A R++    
Sbjct: 185 FATMQVMMFALALYTGYFTDLDVQYRDYFRWVSMIFATPVVLYSAQPFYFSAIRTLLSGK 244

Query: 243 LGMDVPVSLALIFAYIASLVATITEQGEVFFESISMFTFFLLVGRFLEMRARRKAAAASG 302
           L MDV VS+A+  A+ AS  AT+   GEV+FES+SMFTFFLL+GR+ E +AR+KA+ +S 
Sbjct: 245 LNMDVSVSIAIGGAFTASCFATVNGTGEVYFESVSMFTFFLLLGRYFEQKARQKASVSSS 304

Query: 303 NLLKLIPAIATTLDGQ---QVPVKTLKPGDCVRVLPGEHIPADGEIINNRVHIDESMLTG 359
           NL KL+P  A  ++ Q   ++P K L+ GD + V PGE + ADG ++     I+E+MLTG
Sbjct: 305 NLHKLVPLTAHLVNEQGQEEIPAKKLRLGDIILVKPGEMVAADGCVVEGHSSINEAMLTG 364

Query: 360 ESLPVVKATGDHVFAGTLNGDESFDLRVTASKADSVISNIVRLQDDAQSSKPKIAEIADI 419
           E +P+ K     VFAGT+N ++   ++VTA   D +++ I+RLQ+ A ++KP +A +AD 
Sbjct: 365 EQMPIDKPVDSQVFAGTINLEQPIKVKVTALGQDQLVAEIIRLQELASNTKPAVAMLADK 424

Query: 420 VARYFVAIILVIAAGTWFFWHQVRPEDAFWIMLSVLVATCPCALSLATPTALTCATSSMG 479
           ++RYF   IL IA  T+F W Q+ PEDAFW+ LSVLVATCPCAL+LATPTA+TCAT+   
Sbjct: 425 LSRYFSGTILTIATITYFVWLQISPEDAFWVTLSVLVATCPCALALATPTAVTCATAIFT 484

Query: 480 SVGVMLRKNHVFETLCKVNHLVIDKTGTLTHGNIEISTVETLDSLTKESCLAIAAELESH 539
            +G++ RK  VFE L ++ H++ DKTGTLT G + +S V+    L  E  LAIAA LE+ 
Sbjct: 485 RLGIITRKAGVFEKLPQIKHVIFDKTGTLTCGTLSVSEVKCHSHLAIEEVLAIAAALETG 544

Query: 540 ANHPIAKAFRPYKAENVTVSEVRNIIGSGMEGVFAGQKVKIGSAEF--VLGNPLDSAHNC 597
           + HPIA AF  Y   +V  ++V + +G G++G+  G + +IG+A+F   L NP +  +  
Sbjct: 545 SLHPIATAFAAYLTPDVVANQVHHEVGFGVKGLINGTEYRIGNAQFTGALVNP-EFINQQ 603

Query: 598 VFLSLDG----RHVATFHYRDPIRKEAKAFIEKFHAAGIKITLLTGDSQTNAQSVANEMQ 653
           ++L+         +AT   +D IR ++K  +      G ++++ +GDS  +   +A  + 
Sbjct: 604 IWLAWGNDDSLEVLATIEIKDNIRVDSKETVGILKQQGCRVSIASGDSSGHVHQLAKALG 663

Query: 654 IDKVVAQAKPEDKLTYLRELNKTDVTMMVGDGINDAPTLAGAHISVAMGGGTDVAKASAD 713
           I  V +   P DKL  +++L +++  +M GDGINDAP LAGA +SVAMG G+ +AK SAD
Sbjct: 664 ITDVHSGLTPADKLALVKKLQQSNPVVMFGDGINDAPVLAGADLSVAMGSGSAIAKNSAD 723

Query: 714 MVLIGDRLDKLLEARELALKTRKIIRENLAWSLGYNLLILPLAVAGLVAPYIAVVGMSGS 773
           ++L+GD L +  +A  +A  T +IIR+NLAW+LGYN LILPLAV G VAPYIA +GMS S
Sbjct: 724 LILLGDHLSRFTQAVRVAKLTTQIIRQNLAWALGYNALILPLAVTGHVAPYIAAIGMSAS 783

Query: 774 SIIVVTNSLRLLK 786
           S+IVV NSLRLL+
Sbjct: 784 SLIVVGNSLRLLR 796