Pairwise Alignments

Query, 790 a.a., copper-translocating P-type ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 753 a.a., cation transport ATPase, E1-E2 family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  319 bits (818), Expect = 3e-91
 Identities = 235/769 (30%), Positives = 383/769 (49%), Gaps = 88/769 (11%)

Query: 90  SEVTLSLDGVSCAACAWLIEKQLHTEPGVVSIRVNTTTNRALLSWDRTKTQLSHVLAQIH 149
           S++ L +  ++CA C   IEK    E  V S R+N    +  +     K      LA + 
Sbjct: 2   SQIKLYVANMNCAGCVAKIEKAFAAESNV-SARINLADKQVTVDG---KISPDAALAVMD 57

Query: 150 KLGYKA---APFEADKHEAQYHDAMKTYLYRLGIAGLASMQVMMLAVALYLEAFGDLDAE 206
           K G+ A      +A   E +  DA +   Y+L +       V  LAV + +  +G L  E
Sbjct: 58  KAGFPAQLIVDAKAAAEEKRIEDAAE---YKLRMR----QAVAALAVGIPMMLWGLLGGE 110

Query: 207 F-----KNYFRW-VSLIFATPVLLYSALPFYLNAWRSIRGRTLGMDVPVSLALIFAYIAS 260
                      W +  +    +L+ +   FY   WR+++ +T  MD  + L    A++ S
Sbjct: 111 MMINSPSMQLGWGIMGLITLALLIGTGRHFYQGMWRALKAKTTNMDTLIVLGTSTAWLYS 170

Query: 261 LVATITEQG------EVFFESISMFTFFLLVGRFLEMRARRKAAAASGNLLKLIPAIATT 314
           +V  +           V+FE+  M    + +G  LE++AR K + A   LL L  + A  
Sbjct: 171 MVMVLIPSAFPMDTRHVYFEASVMILGLINLGHALELKARGKTSEAVQRLLGLQSSRAIR 230

Query: 315 LD---GQQVPVKTLKPGDCVRVLPGEHIPADGEIINNRVHIDESMLTGESLPVVKATGDH 371
           +     ++V +  LK GD +R+ PG+ +  DG + + +  +DE+MLTGE +PV K  GD 
Sbjct: 231 IGENGDEEVEISQLKLGDKLRLRPGDRVALDGVVESGQSLLDEAMLTGEPIPVPKQVGDS 290

Query: 372 VFAGTLNGDESFDLRVTASKADSVISNIVRLQDDAQSSKPKIAEIADIVARYFVAIILVI 431
           + AGT+NG+ S   RV+A + D+ ++ I+ L  +AQ+SK  I  +AD ++  FV  ++VI
Sbjct: 291 LSAGTVNGNGSLVYRVSAGQRDTRLAKIIALVQEAQTSKMPIGRLADNISAVFVPTVVVI 350

Query: 432 AAGTWFFWHQVRPE----DAFWIMLSVLVATCPCALSLATPTALTCATSSMGSVGVMLRK 487
           A      W+ V PE     A  ++ SVL+  CPCAL LATP ++  +      +GV+++ 
Sbjct: 351 ALLAAAIWYLVGPEPALSHALVVLTSVLIIACPCALGLATPMSIMVSVGRAAQMGVLVKN 410

Query: 488 NHVFETLCKVNHLVIDKTGTLTHGNIEISTV-------ETLDSLTKESCLAIAAELESHA 540
               ++  KV+ +V+DKTGT+T G  E++ +       + L +  K + L   A LE H+
Sbjct: 411 GEALQSASKVDCVVLDKTGTVTQGKPEVTDIHWHGEYEQALSADDKSALLGAIASLEQHS 470

Query: 541 NHPIAKAFRPYKAE---NVTVSEV-RNIIGSGMEGVFAGQKVKIGSAEFVLGN------- 589
            HP+A A   Y  +    +  +E+  N  G G+EG       ++   ++++GN       
Sbjct: 471 EHPLANAIVSYVKQASIPLPATEIFTNHQGKGIEG-------RVNYTDYLVGNQALMTAF 523

Query: 590 ---PLDSAHNC-------------------VFLSLDGRHVATFHYRDPIRKEAKAFIEKF 627
              PL    N                    ++++  G+ VAT    DPI+ +AK  I   
Sbjct: 524 KVPPLTVLANSNETSELDATAHFAKQGKTPIYVAEAGKLVATIAIADPIKADAKEAISAI 583

Query: 628 HAAGIKITLLTGDSQTNAQSVANEMQIDKVVAQAKPEDKLTYLRELNKT-DVTMMVGDGI 686
            + GI++ LLTGD+   AQ+VA ++ I++V+A   PE K  +++ L +   V  MVGDGI
Sbjct: 584 RSQGIRVVLLTGDNPQTAQAVAEQVGIEEVIAGVLPEQKQQHIKALQQQGHVVAMVGDGI 643

Query: 687 NDAPTLAGAHISVAMGGGTDVAKASADMVLIGDRLDKLLEARELALKTRKIIRENLAWSL 746
           NDAP L  A + +AMG GT+VA  SADM L+  +L  +     L+  T   I++NL  + 
Sbjct: 644 NDAPALMSADVGIAMGSGTEVAIESADMTLLSHQLIVIANLFALSRATMTNIKQNLFGAF 703

Query: 747 GYNLLILPLA-------VAGLVAPYIAVVGMSGSSIIVVTNSLRLLKKQ 788
            YN + +P+A          L++P IA   M+ SS+ VVTN+ RL +++
Sbjct: 704 IYNSIGIPVAAGVLYPLTGMLLSPVIAGAAMALSSLTVVTNANRLRQQK 752