Pairwise Alignments

Query, 790 a.a., copper-translocating P-type ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 738 a.a., cation-transporting ATPase pacS (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  321 bits (822), Expect = 1e-91
 Identities = 230/735 (31%), Positives = 377/735 (51%), Gaps = 60/735 (8%)

Query: 101 CAACAWLIEKQLHTEPGVVSIRVNTTTNRALLSWDRTKTQLSHVLAQIHKLGYKAAPFEA 160
           CA CA  +EK +   PGVV   VN  +N   +S++  K     + A +   GY     EA
Sbjct: 16  CAGCANNVEKTVKKLPGVVDASVNFASNTLTISYEDDKLTPGEIRAAVLAAGYDLIVEEA 75

Query: 161 DKHEAQYHDAMKTYL-YRLGIAGLASMQVMMLAVALYLEAFGDLDAEFKNYFRWVSLIFA 219
           +K E +  +  K YL  +  + G     V +L  ++ L            Y   + ++ A
Sbjct: 76  NKEERREEEQHKRYLRLKRKVIGAWIFVVPLLIFSMLLMHMP--------YSNEIQMLLA 127

Query: 220 TPVLLYSALPFYLNAWRSIRGRTLGMDVPVSLALIFAYIASLVATI-----TEQG---EV 271
            PV++     F+  AW+  +     MD  V+L+   A++ SL  T      T++G    V
Sbjct: 128 IPVMVLFGGSFFTGAWKQAKIGRSNMDTLVALSTSIAFLFSLFNTFFPQFWTDRGLEPHV 187

Query: 272 FFESISMFTFFLLVGRFLEMRARRKAAAASGNLLKLIPAIATTLDG---QQVPVKTLKPG 328
           ++E+ ++   F+L G+ +E RA+   + A   L+ + P +A  L G   +++ +  L+ G
Sbjct: 188 YYEASAVIIAFVLTGKMMEERAKGNTSDAIRKLMGMQPKVARVLRGGVEEEIQIDLLQVG 247

Query: 329 DCVRVLPGEHIPADGEIINNRVHIDESMLTGESLPVVKATGDHVFAGTLNGDESFDLRVT 388
           D V V PGE IP DG++     ++DESM++GE +PV K  GD V AGT+N   SF +R +
Sbjct: 248 DMVVVRPGEQIPVDGQLSEGDSYVDESMISGEPIPVEKKKGDKVLAGTINQRGSFIIRAS 307

Query: 389 ASKADSVISNIVRLQDDAQSSKPKIAEIADIVARYFVAIILVIAAGTWFFWHQVRPED-- 446
              +D+V++ I+ +  +AQ SK  +  I D +   FV ++L IA  T+  W  +   +  
Sbjct: 308 QVGSDTVLARIIHMVQEAQGSKAPVQRIVDRITGIFVPVVLGIAILTFVLWVAIGGSEYI 367

Query: 447 AFWIM--LSVLVATCPCALSLATPTALTCATSSMGSVGVMLRKNHVFETLCKVNHLVIDK 504
           ++ I+  +SVLV  CPCAL LATPTAL           ++++     E + KV+ +V+DK
Sbjct: 368 SYGILSAVSVLVIACPCALGLATPTALMVGIGKAAGQHILIKDAVALEQMRKVDVVVLDK 427

Query: 505 TGTLTHGNIEIS---TVETLDSLTKESCLAIAAELESHANHPIAKAF-----RPYKAENV 556
           TGTLT G+   +     +  +   K+  + +AAEL+S   HP+A A         K    
Sbjct: 428 TGTLTEGHPTATGWLWAQPQEEHFKD--VLLAAELKS--EHPLAGAIVAVLQDEEKITPA 483

Query: 557 TVSEVRNIIGSGMEGVFAGQKVKIGSAEF----------VLGNPL----DSAHNCVFLSL 602
            +S   +I G G++  + G+   +GS +           V+ + L       +  ++   
Sbjct: 484 PLSSFESITGKGIKVSYQGKTYWVGSHKLLKDFSATVSDVMADMLVHYESDGNGIIYFGR 543

Query: 603 DGRHVATFHYRDPIRKEAKAFIEKFHAAGIKITLLTGDSQTNAQSVANEMQIDKVVAQAK 662
           +   +A     DPI+  +   +++    GI I +LTGD Q  A +V++ + I++ VA A 
Sbjct: 544 ENELLAIIAVSDPIKATSAEAVKELKRQGIDICMLTGDGQRTALAVSSRLGIERFVADAL 603

Query: 663 PEDKLTYLRELN-KTDVTMMVGDGINDAPTLAGAHISVAMGGGTDVAKASADMVLIGDRL 721
           P+DK  ++REL  +     MVGDGIND+  LA A +S+AMG GTD+A   A + L+   L
Sbjct: 604 PDDKAEFVRELQMQGKKVAMVGDGINDSQALALADVSIAMGKGTDIAMDVAMVTLMTSDL 663

Query: 722 DKLLEARELALKTRKIIRENLAWSLGYNLLILPLAVAG--------LVAPYIAVVGMSGS 773
             L +A EL+ +T ++I +NL W+  YNL+ +P+A AG        L+ P +A   M+ S
Sbjct: 664 LLLPKAFELSRQTVRLIHQNLFWAFIYNLIGIPIA-AGVLFPINGLLLNPMLASAAMAFS 722

Query: 774 SIIVVTNSLRLLKKQ 788
           S+ VV NSL L +++
Sbjct: 723 SVSVVLNSLSLGRRK 737