Pairwise Alignments

Query, 224 a.a., cytochrome biogenesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  211 bits (536), Expect = 1e-59
 Identities = 103/219 (47%), Positives = 145/219 (66%), Gaps = 8/219 (3%)

Query: 7   GAWVVGLLGAGHCLGMCGGISALLTL---DPSKSSP-----ALLLYYNLGRLLSYALIGG 58
           GA++VGL+GA HC GMCGG+    +    +P + +        L  YNLGR+LSY L G 
Sbjct: 12  GAFLVGLMGAAHCFGMCGGLVGAFSSQLPNPKQGNHLAHQLTYLFSYNLGRILSYTLAGA 71

Query: 59  IVGGITASLTELIDVQSALVWLRIFAAVLMIVLGLYIGRWWFGLLWLEKVGQKIWRWISP 118
           +VGG +A L  L ++ S L+ LRIFA ++MI  GLYI + W G++ +E++GQ +WR++ P
Sbjct: 72  LVGGSSAMLGHLFELDSYLLVLRIFAGIMMIATGLYIAKIWVGIVQIERLGQVLWRYLKP 131

Query: 119 LGKTLLPLKKQWHALPFGLVWGWLPCGLVYSMLTWSAVAGSFSQGALIMLSFGFGTLPAM 178
           + + L+P+     A+  GL+WGWLPCGLVYS LTWS  AGS SQGALIML+FG GTLPA+
Sbjct: 132 IAQRLVPITTPMQAITAGLIWGWLPCGLVYSTLTWSVAAGSASQGALIMLAFGLGTLPAL 191

Query: 179 LASGWGANKLMHWQNSHLFRQCAAILVIGYGLFTAYDAV 217
           L++G  A +L +W      R  + +L+I +G  T Y A+
Sbjct: 192 LSAGVAAKRLANWVQQKTVRLLSGLLLIVFGGQTLYIAL 230