Pairwise Alignments

Query, 250 a.a., transcriptional regulator FNR from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 64.3 bits (155), Expect = 2e-15
 Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 1/240 (0%)

Query: 5   KPAAKRIQSGGCAIHCQDCSISQLCIPFTLNESELDQLDQIIERKKPIQKGQELFKAGDE 64
           K A K+      +  C+ C + +L      +E E+  +       + +  G  L   G+ 
Sbjct: 11  KTALKKPIRSFVSTSCETCPLRKLSSVRAFSEEEMSFIKGFKVADQELSAGTTLLHEGEN 70

Query: 65  LRSLYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFDAITGDQHPSFAQALETSMVCEI 124
              +Y +RSG    Y + E G  Q+  F L GDL+G  A    +     + L    VC  
Sbjct: 71  SAFVYTVRSGWAIRYKLLEDGRRQVLNFVLPGDLIGLQASLFSEMEHSVETLTPVGVCCF 130

Query: 125 PYEILDDLSGKMPKLRQQIMRLMSNEIKGDQEMILLLSKKNAEERLAAFLYNLSTRFS-Q 183
           P E   +L+ +   L   ++ L + E +   E +L + ++ A ER+A  L  L  R +  
Sbjct: 131 PRERFLELAQEGAGLAFDVIWLTAREEQAISEHLLSVGQRTALERVAYVLLYLHDRLALL 190

Query: 184 RGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSEILSVKGKYITILNHAELMELA 243
                  F    ++  + + LGL++   ++ L +      +      I ++N A+L ELA
Sbjct: 191 EKVRDGAFEAPFSQQLLADVLGLSLVHTNKTLRKLVDRGFVRWTQGTIHLVNLADLRELA 250