Pairwise Alignments

Query, 250 a.a., transcriptional regulator FNR from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., fumarate/nitrate reduction transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  375 bits (962), Expect = e-109
 Identities = 185/240 (77%), Positives = 211/240 (87%)

Query: 8   AKRIQSGGCAIHCQDCSISQLCIPFTLNESELDQLDQIIERKKPIQKGQELFKAGDELRS 67
           ++R    GCAIHC DCS+  LCIPFTLN +ELDQLD IIERKKPIQKG+++FK+GD L+S
Sbjct: 7   SRRSAVPGCAIHCHDCSMGTLCIPFTLNNNELDQLDDIIERKKPIQKGEQIFKSGDSLKS 66

Query: 68  LYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFDAITGDQHPSFAQALETSMVCEIPYE 127
           LYAIRSGTIKSYTITEQGDEQIT FHLAGD++GFD I    H SFAQALETSMVCEIP++
Sbjct: 67  LYAIRSGTIKSYTITEQGDEQITGFHLAGDVIGFDGIHSQIHQSFAQALETSMVCEIPFD 126

Query: 128 ILDDLSGKMPKLRQQIMRLMSNEIKGDQEMILLLSKKNAEERLAAFLYNLSTRFSQRGFS 187
            LD+LSG MPKLRQQIMRLMSNEI+ DQEMILLLSKKNAEERLAAF+ NL++RF  RGFS
Sbjct: 127 TLDELSGTMPKLRQQIMRLMSNEIQSDQEMILLLSKKNAEERLAAFISNLASRFGSRGFS 186

Query: 188 PREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSEILSVKGKYITILNHAELMELAGVSK 247
           P+EFRLTMTRGDIGNYLGLTVETISRLLGRFQK+E++ VKGKYITI++   L +LAG +K
Sbjct: 187 PKEFRLTMTRGDIGNYLGLTVETISRLLGRFQKAELIEVKGKYITIVDFDSLNKLAGNNK 246