Pairwise Alignments

Query, 250 a.a., transcriptional regulator FNR from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., cAMP-regulatory protein (RefSeq) from Shewanella loihica PV-4

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 40/178 (22%), Positives = 85/178 (47%), Gaps = 3/178 (1%)

Query: 58  LFKAGDELRSLYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFDAITGDQ--HPSFAQA 115
           L  AG++  +LY I  G++      E+G E I ++   GD +G   +  +Q    ++ +A
Sbjct: 31  LIHAGEDSDTLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEQAERTAWVRA 90

Query: 116 LETSMVCEIPYEILDDLSGKMPKLRQQIMRLMSNEIKGDQEMILLLSKKNAEERLAAFLY 175
            +   + EI Y+    L    P++  ++   M+  ++   + +  L+  +   R+A  L 
Sbjct: 91  KQACEIAEISYKKFKQLIQVNPEILMKLSSQMAYRLQSTSQKVGDLAFLDVAGRIAQTLL 150

Query: 176 NLSTRFSQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSEILSVKGKYITI 233
           +L+ +       P   ++ +TR +IG  +G + ET+ R+L   ++  ++   GK I +
Sbjct: 151 HLAKQ-PDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLIQAHGKTIVV 207