Pairwise Alignments

Query, 250 a.a., transcriptional regulator FNR from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., electron transport regulator a (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  372 bits (955), Expect = e-108
 Identities = 186/244 (76%), Positives = 208/244 (85%)

Query: 1   MISEKPAAKRIQSGGCAIHCQDCSISQLCIPFTLNESELDQLDQIIERKKPIQKGQELFK 60
           M  E+   +R  + GCAIHC DCS+  LCIPFTLN +ELDQLD IIERKKPIQKG+++FK
Sbjct: 5   MTIEQNKNRRSAASGCAIHCHDCSMGTLCIPFTLNANELDQLDDIIERKKPIQKGEQIFK 64

Query: 61  AGDELRSLYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFDAITGDQHPSFAQALETSM 120
           +GD L+SL+AIRSGTIKSYTITEQGDEQIT FHLAGD++GFD I    H SFAQALETSM
Sbjct: 65  SGDPLKSLFAIRSGTIKSYTITEQGDEQITGFHLAGDVIGFDGIHAQSHQSFAQALETSM 124

Query: 121 VCEIPYEILDDLSGKMPKLRQQIMRLMSNEIKGDQEMILLLSKKNAEERLAAFLYNLSTR 180
           VCEIP+ ILD+LSG MPKLRQQIMRLMSNEI  DQEMILLLSKKNAEERLAAF+ NL+ R
Sbjct: 125 VCEIPFNILDELSGTMPKLRQQIMRLMSNEIMSDQEMILLLSKKNAEERLAAFISNLANR 184

Query: 181 FSQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSEILSVKGKYITILNHAELM 240
           F  RGFS +EFRLTMTRGDIGNYLGLTVETISRLLGRFQKS ++ VKGKYI I++H EL 
Sbjct: 185 FGNRGFSAKEFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGLIEVKGKYIIIVDHHELN 244

Query: 241 ELAG 244
            LAG
Sbjct: 245 LLAG 248