Pairwise Alignments

Query, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., universal stress protein UspA from Pseudomonas fluorescens FW300-N2E3

 Score =  116 bits (291), Expect = 6e-31
 Identities = 86/313 (27%), Positives = 147/313 (46%), Gaps = 35/313 (11%)

Query: 1   MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD 60
           M     ILVV +   +E  AL RA  +A     V+     L I D  +D +++LS+ +  
Sbjct: 1   MQAIRSILVVIEPLPEESLALKRAKMIA----GVTQAHLHLLICDKEHDHSALLSVLKAS 56

Query: 61  AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK 120
               G     EQ                     W+   +E II    A    ++IK    
Sbjct: 57  LQEDGHSVTTEQ--------------------AWNKSLHETIIDVQQAEGCGLVIKQHFP 96

Query: 121 HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE 180
            + L+  + TP DW L+R+CP+PVLLVK +       I+A++ VG+    H  L+  +V+
Sbjct: 97  DNPLKKALLTPADWKLLRQCPSPVLLVKTSKPWTGGTILAAIDVGNNDPEHRVLHASIVD 156

Query: 181 QLLNLSKRLGASPYLVNAYP---VTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKH 237
              +++    A  ++++A+P   ++ A+   +L E         +   +  A KA + + 
Sbjct: 157 HGFDIAHLAKAHLHVISAHPSPMLSAADPVFQLKE--------TIEARYREACKAFQAEF 208

Query: 238 GLSEEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDV 297
            + ++   +++G  + +IP  A +L A++ ++GT  RTG S   IGNTAE V+D +  DV
Sbjct: 209 DIDDDHLHIEEGPADVLIPYIAHKLQASVTVIGTVARTGFSGALIGNTAEVVLDSLESDV 268

Query: 298 LALKPNGYVSPLD 310
           L LKP   +  L+
Sbjct: 269 LVLKPQEIMDHLE 281