Pairwise Alignments

Query, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., universal stress protein from Pseudomonas fluorescens FW300-N2E3

 Score =  104 bits (260), Expect = 2e-27
 Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 9/308 (2%)

Query: 1   MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD 60
           M  Y ++L++AD    + PAL RA+ LA+ S +V H+  F+        +  +   +  +
Sbjct: 1   MGHYQRLLLIADRTLHQSPALLRAVALAKASGAVLHVCAFVE----PVPIVHLWDEKVDE 56

Query: 61  AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK 120
           A  +  + +  +WM    +    + ++  ++VV+   P   I+  +   + D+LIK    
Sbjct: 57  AAFQSYLRRYRRWMSEEIQRLSGEGLKVSVEVVFTTHPLLDILKHVEEFKPDLLIKDATL 116

Query: 121 HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE 180
             +L+ V  TP D HL+R+CP  V LV  A +     I+A+V           LND +++
Sbjct: 117 EPVLKRVFITPLDCHLLRECPVSVHLVNQARYSLPHRIVAAVDPFDPQTQISGLNDTIIQ 176

Query: 181 QLLNLSKRLGASPYLVNAYPVTPANITIELPEFD---PTTYTDAVRGHHLTAMKALRQKH 237
               L+ +  A  +L+ AY ++PA    + P  +      Y + +R     A   L  ++
Sbjct: 177 TANALALQCDAPLHLLYAYDLSPA-FNGDAPLVNGGWSMDYMEELRESLHLAFVTLADRY 235

Query: 238 GLSEEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDV 297
           G+  E+     G P   + E  ++  A +V++GT  R GL  + IG+T E  +  +   +
Sbjct: 236 GIPPERRHFVMGQPVRALTEFVEEYLADVVVMGTVHRVGLDRL-IGSTTERALYSVPGSI 294

Query: 298 LALKPNGY 305
           LA++  G+
Sbjct: 295 LAVRSPGF 302