Pairwise Alignments

Query, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  111 bits (277), Expect = 2e-29
 Identities = 71/302 (23%), Positives = 145/302 (48%), Gaps = 14/302 (4%)

Query: 1   MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD 60
           M  +S++LV  D     +PAL +A+ LA +S +   +T           ++  L   ++ 
Sbjct: 1   MGHFSRVLVATDDGLHAKPALRKAVHLANQSHA--DLTMLRVQLPKQAGLSQWL---QQL 55

Query: 61  AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK 120
                + HQR++        Y DK ++  +K         A++ E+   ++D+LI    +
Sbjct: 56  LTAPNISHQRQKH-----PSYPDKDIRLVLKHCHAPTLANAVLDELSQRDYDLLILEHHE 110

Query: 121 HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE 180
           +  L        DW L+++ P PVL V N  W  +  ++ ++ V  E + H   N ++++
Sbjct: 111 YSALRCEFGHTEDWQLLQQVPIPVLFVSNEPWENDGKLLTALEVDDEGERHRQFNRQLLD 170

Query: 181 QLLNLSKRLGASPYLVNAYPVTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKHGLS 240
               L++ L    +L+  Y     N++ E  + +  T+           ++   +   L 
Sbjct: 171 VSDELARLLRMELHLLTCYQAHDMNVSFENRDLNHHTWV----AEQWRRLRQTAEPLSLE 226

Query: 241 EEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDVLAL 300
           +++  +  GLP+D++PEAA+Q ++ +V++G +  T + +   G  +E +++++ CDVLAL
Sbjct: 227 DKRLHLAAGLPDDMVPEAARQWHSNLVVMGASEHTSMLSTLKGRASEQLLNQLKCDVLAL 286

Query: 301 KP 302
           KP
Sbjct: 287 KP 288