Pairwise Alignments

Query, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., universal stress protein UspE (RefSeq) from Shewanella loihica PV-4

 Score =  345 bits (884), Expect = 1e-99
 Identities = 170/312 (54%), Positives = 222/312 (71%), Gaps = 2/312 (0%)

Query: 1   MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD 60
           M  Y KILVV D   D+Q ALARA++LA K+ +   IT FLSI+DFSY+MTS+LS  ER+
Sbjct: 1   MKDYHKILVVVDPTSDKQSALARAVELASKNQA--SITVFLSIFDFSYEMTSILSGHERE 58

Query: 61  AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK 120
           AMR+GVI QR  W+  I   Y D  V  D +V+WHNRP+E+II     G +D+++K T +
Sbjct: 59  AMRQGVIAQRRAWLDDILGGYKDSGVAIDSEVIWHNRPFESIILHAIEGSYDLIVKGTHE 118

Query: 121 HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE 180
           HD L+SVIFTPTDWHLMRK P PVLLVK  DWP    I+ +++V SE D H  LN +++E
Sbjct: 119 HDKLKSVIFTPTDWHLMRKAPVPVLLVKEHDWPVAGKILCAINVASEDDDHQTLNGKIIE 178

Query: 181 QLLNLSKRLGASPYLVNAYPVTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKHGLS 240
             L+L+K+  A  +LVN YP TP N+ IELP+FD  TY++ +R  H   +  L   +G+S
Sbjct: 179 HALDLAKKFDAQVHLVNGYPGTPVNLAIELPDFDAHTYSETIRMQHEQRVCYLASNYGIS 238

Query: 241 EEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDVLAL 300
            +   +++GLPEDVIPE A+QL+A +VILGT GRTG SA  IGNTAEHVID INCD+LA+
Sbjct: 239 SDFCHIKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNTAEHVIDSINCDLLAI 298

Query: 301 KPNGYVSPLDPQ 312
           KP+GY SPL+ +
Sbjct: 299 KPDGYKSPLEEE 310