Pairwise Alignments

Query, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., universal stress protein family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  344 bits (882), Expect = 2e-99
 Identities = 165/310 (53%), Positives = 222/310 (71%), Gaps = 2/310 (0%)

Query: 1   MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD 60
           M  Y KILVV D   + Q ALARA+ LA KS +  H+T FLSI+DFSY+MTS+LS +ER+
Sbjct: 1   MKDYQKILVVVDPTTENQVALARAVTLASKSNA--HVTVFLSIFDFSYEMTSILSSQERE 58

Query: 61  AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK 120
           AMR+GVI QR  W++ +  PY    +  D +V+WHNRP+E+II    AG++D+++K T  
Sbjct: 59  AMRQGVIDQRVAWIQDLLAPYNHLGLNIDTQVIWHNRPFESIINHAIAGQYDLIVKGTHA 118

Query: 121 HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE 180
           HD L++VIFTPTDWHLMRK P PVL+VK+ DWPE   I+ +V+V +E   H  LN +++E
Sbjct: 119 HDKLKAVIFTPTDWHLMRKAPVPVLMVKDHDWPETGKILCAVNVATEDTDHQMLNGKIIE 178

Query: 181 QLLNLSKRLGASPYLVNAYPVTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKHGLS 240
              +L+ +  A  +LVN +P TP N+ IELP+FD  TY D +R  H   ++ L   +G+ 
Sbjct: 179 HAKDLAGKFAAEVHLVNGFPGTPVNLAIELPDFDAQTYNDTIRLQHEQRVQYLADAYGID 238

Query: 241 EEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDVLAL 300
           ++   V++GLPEDVIPE A+QL+A +VILGT GRTG SA  IGNTAEHVID INCD+LA+
Sbjct: 239 KQNCHVKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNTAEHVIDSINCDLLAI 298

Query: 301 KPNGYVSPLD 310
           KP+GY SPL+
Sbjct: 299 KPDGYKSPLE 308