Pairwise Alignments

Query, 315 a.a., universal stress protein UspE from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., UspA domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  110 bits (275), Expect = 5e-29
 Identities = 97/321 (30%), Positives = 154/321 (47%), Gaps = 24/321 (7%)

Query: 6   KILVVADINHDEQPALARAMQLAQK-STSVSHITFFLSIYDFSYDMTSMLSLEERDAMRK 64
           KIL VAD + + Q AL  A+ LA     S+  I      +D S  + S LS E+   + +
Sbjct: 10  KILAVADAS-EVQIALQSALTLADTLGASLEVIACVEPPHDLS--ILSRLSGEDPGRLIE 66

Query: 65  GVIHQREQWMRSIAEPYL-DKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRKHDM 123
             + +  + +R+  +  + D  +   + V    + Y  II  +   E D ++K       
Sbjct: 67  EAVERTREEVRARLDATMHDTPLDLSVAV---GKAYLEIIRHVARSECDFVVKKAEPLSG 123

Query: 124 LESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHV----GSELDTHIDLNDRMV 179
           ++  +F  TD HL+RKCP PV L           ++A+V +     +E +T   LN R+V
Sbjct: 124 IDRFLFASTDQHLLRKCPCPVWLQTPTASKSPRRVLAAVDLDVWDAAEPETLAALNRRVV 183

Query: 180 EQLLNLSKRLGASPYLVNAYP-VTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKHG 238
                ++    A   +++A+  +    I     E D     D      L A      K  
Sbjct: 184 AAACMVADAPDAEVIVLHAWEAIGQGMIWAFSGESDARISADRYVNEILDARHDAMNKF- 242

Query: 239 LSEEQTLVQQG----------LPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEH 288
           L++ +T + QG           PE VI + ++QL A +V++GT  RTGLS VFIGNTAE+
Sbjct: 243 LAQVRTEIGQGPRLLPRLARGAPETVIHDQSRQLAAELVVMGTVARTGLSGVFIGNTAEN 302

Query: 289 VIDKINCDVLALKPNGYVSPL 309
           +I+ + C VLA+KP+G+VSPL
Sbjct: 303 IINSLECPVLAVKPDGFVSPL 323