Pairwise Alignments

Query, 310 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., tRNA(Cytosine32)-2-thiocytidine synthetase from Pseudomonas fluorescens FW300-N2E2

 Score =  392 bits (1006), Expect = e-114
 Identities = 183/258 (70%), Positives = 223/258 (86%), Gaps = 2/258 (0%)

Query: 15  NFNKLQKRIRRNTGQAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELV 74
           N NKLQKR+RR  G+A+ADFNMIEDGD++MVCLSGGKDS+T+LD+LM LQK API F++V
Sbjct: 7   NQNKLQKRLRRLAGEAVADFNMIEDGDKVMVCLSGGKDSYTLLDVLMHLQKVAPIKFDIV 66

Query: 75  AVNLDQKQPGFPEHVLPEYLESLGVEYKIVEEDTYAIVQDKVPEGKTTCALCSRLRRGIL 134
           AVN+DQKQPGFPEHVLP YLESLGVEY IVE+DTY++V++ +PEGKTTC+LCSRLRRG L
Sbjct: 67  AVNMDQKQPGFPEHVLPAYLESLGVEYHIVEKDTYSVVKELIPEGKTTCSLCSRLRRGTL 126

Query: 135 YRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVSDNGEHVVIRPLAYCRE 194
           Y  A E+GATK+ALGHHRDDI+ET FLNMFY G +K MPPKL +D+G +VVIRPLAYC E
Sbjct: 127 YTFADEIGATKMALGHHRDDIVETFFLNMFYNGSLKAMPPKLRADDGRNVVIRPLAYCSE 186

Query: 195 KDIIKYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFRAMQNVVPSH 254
           KDI  YSD + +PIIPCNLCGSQ NLQRQ VK+ML +W+++ PGR E++FR +QNV+PS 
Sbjct: 187 KDIQAYSDFKQFPIIPCNLCGSQENLQRQVVKEMLQEWERKTPGRTESIFRGLQNVIPSQ 246

Query: 255 LADFSLFDFKS--IDKNS 270
           LAD +LFDF +  ID+N+
Sbjct: 247 LADRNLFDFTNLRIDENA 264