Pairwise Alignments

Query, 310 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  398 bits (1023), Expect = e-116
 Identities = 188/272 (69%), Positives = 227/272 (83%)

Query: 7   ELTKAQQYNFNKLQKRIRRNTGQAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKS 66
           EL+K Q    NKLQKR+RR  G AIAD+NMIE+GDR+M CLSGGKDS+ MLDIL++LQ+ 
Sbjct: 8   ELSKKQTTRLNKLQKRLRREVGSAIADYNMIEEGDRVMCCLSGGKDSYAMLDILINLQQR 67

Query: 67  APISFELVAVNLDQKQPGFPEHVLPEYLESLGVEYKIVEEDTYAIVQDKVPEGKTTCALC 126
           AP+SFE+VAVNLDQKQPGFPEHVLP YLE+LGV + I+E+DTY+IV+DK+PEGKTTC+LC
Sbjct: 68  APVSFEIVAVNLDQKQPGFPEHVLPAYLETLGVPFHILEKDTYSIVKDKIPEGKTTCSLC 127

Query: 127 SRLRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVSDNGEHVVI 186
           SRLRRG LY  A+ +GATKIALGHHRDDI+ETLFLNMFYGGKMK MPPKL+SD+G +VVI
Sbjct: 128 SRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFYGGKMKAMPPKLLSDDGANVVI 187

Query: 187 RPLAYCREKDIIKYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFRA 246
           RPLAYCREKDI +Y++++ +PIIPCNLCGSQ NL+R AVK ML  WD++ PGRIET+F A
Sbjct: 188 RPLAYCREKDIAEYAELKQFPIIPCNLCGSQENLKRAAVKDMLKQWDRQHPGRIETIFTA 247

Query: 247 MQNVVPSHLADFSLFDFKSIDKNSGVINGGDI 278
           MQN  PS   D   FDF S+ ++      GD+
Sbjct: 248 MQNTAPSQGVDREQFDFVSLKQDPNAEFRGDV 279