Pairwise Alignments

Query, 310 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., PP-loop domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  380 bits (977), Expect = e-110
 Identities = 187/310 (60%), Positives = 236/310 (76%), Gaps = 6/310 (1%)

Query: 6   QELTKAQQYNFNKLQKRIRRNTGQAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQK 65
           + L+K Q    NKLQKR+RR  G AIAD+NMIE+GD +M CLSGGKDS+ MLDIL++L +
Sbjct: 4   ETLSKKQITRLNKLQKRLRREVGSAIADYNMIEEGDTVMCCLSGGKDSYAMLDILVNLLQ 63

Query: 66  SAPISFELVAVNLDQKQPGFPEHVLPEYLESLGVEYKIVEEDTYAIVQDKVPEGKTTCAL 125
            AP++F LVAVNLDQKQPGFPE +LP YL+SL V Y I+E+DTY+IV+DK+PEGKTTC+L
Sbjct: 64  RAPVNFNLVAVNLDQKQPGFPEDILPAYLDSLKVPYHILEKDTYSIVKDKIPEGKTTCSL 123

Query: 126 CSRLRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVSDNGEHVV 185
           CSRLRRG LY  A+++GATKIALGHHRDDI+ET+FLNMFY GK+K MPPKL+SD+G +VV
Sbjct: 124 CSRLRRGTLYGFAQKIGATKIALGHHRDDIIETMFLNMFYAGKLKAMPPKLLSDDGANVV 183

Query: 186 IRPLAYCREKDIIKYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFR 245
           IRPLAY REKDI +Y++++ +PIIPCNLCGSQ NL+R AVK+ML  WDK+FPGRIET+F 
Sbjct: 184 IRPLAYSREKDIAEYAELKAFPIIPCNLCGSQENLKRAAVKEMLKSWDKQFPGRIETIFT 243

Query: 246 AMQNVVPSHLADFSLFDFKSIDKNSGVINGGDI------GFDKEEIAPQVVEDEDLVMEF 299
           AMQN  PS   D   FDF S+ ++      GD+       FD  ++A     D D     
Sbjct: 244 AMQNTSPSQGVDRDQFDFVSLKQDPDAPMKGDVAESDLPAFDFLDLANSGHIDLDAAKRS 303

Query: 300 DPSLQLNVTN 309
              L+++V +
Sbjct: 304 SDLLKIDVVS 313