Pairwise Alignments

Query, 310 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., TIGR00269 family protein from Methanococcus maripaludis JJ

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 41/255 (16%)

Query: 20  QKRIRRNTGQAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELVAVNLD 79
           ++++R+  G+ +   N+     ++ + LSGGKDS  M  +L    K  P S  L+A+ ++
Sbjct: 31  KRKVRKTLGRDVLKNNI-----KVAMGLSGGKDSLVMAYLLNEYYKQIPNS-NLIAIMVN 84

Query: 80  QKQPGFPEHVLP---EYLESLGVEYKIVEEDTYA------IVQDKVPEGKTT--CALCSR 128
           +   G+    +    ++ E  G+EYKIV    Y       IV+    +  T   C+ C  
Sbjct: 85  EGIEGYRTDGIDAAVKFCEEYGIEYKIVHFKDYLGTNLDEIVKIAKEKNLTMNPCSFCGV 144

Query: 129 LRRGILYRTAKELGATKIALGHHRDDILETLFLN---------MFYGGKMKGMPPKLVSD 179
           +RR IL R + E     +A+GH+ DD+ + + +N          F G  +K   PK V  
Sbjct: 145 IRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMNYIEGDVKKLAFLGKSLK--HPKFVKR 202

Query: 180 NGEHVVIRPLAYCREKDIIKYSDM--RGYPIIPCNL-CGSQPNLQRQAVKQMLNDWDKRF 236
                 I+PL    E +++  ++M    Y   PC   C S     R  V  + ++ +K  
Sbjct: 203 ------IKPLEKIPEDEVLLLANMLELKYHKSPCPYSCLS----FRSEVSDITDNLEKNH 252

Query: 237 PGRIETMFRAMQNVV 251
           PG   ++ R  + ++
Sbjct: 253 PGSKYSIVRGYERLL 267