Pairwise Alignments

Query, 310 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., tRNA 2-thiocytidine biosynthesis protein TtcA from Herbaspirillum seropedicae SmR1

 Score =  381 bits (978), Expect = e-110
 Identities = 183/269 (68%), Positives = 216/269 (80%)

Query: 16  FNKLQKRIRRNTGQAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELVA 75
           F  LQK IRR TG+AIADF+MI DGD IM C+SGG DS+TMLD L  LQ  AP+ FE++A
Sbjct: 9   FELLQKNIRRLTGRAIADFDMIRDGDVIMACMSGGADSYTMLDTLRYLQSVAPVKFEIIA 68

Query: 76  VNLDQKQPGFPEHVLPEYLESLGVEYKIVEEDTYAIVQDKVPEGKTTCALCSRLRRGILY 135
           VNLDQKQPGFPEH+LPEY E +GV Y+IVEEDTY+IV+DK+  GKTTC+LCSRLRRGILY
Sbjct: 69  VNLDQKQPGFPEHILPEYFERIGVRYRIVEEDTYSIVKDKIAPGKTTCSLCSRLRRGILY 128

Query: 136 RTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVSDNGEHVVIRPLAYCREK 195
           R AKELGATKIALGHHRDDIL T  LNMFYGGK+K MPPKL++D+GE+VVIRPLAY RE 
Sbjct: 129 RVAKELGATKIALGHHRDDILHTFMLNMFYGGKIKTMPPKLIADDGENVVIRPLAYVREP 188

Query: 196 DIIKYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFRAMQNVVPSHL 255
           DI KY+    +PIIPCNLCGSQPNLQRQA+++MLN+W+K  P  I++MF AM N+ PSH+
Sbjct: 189 DIKKYAAAMQFPIIPCNLCGSQPNLQRQAMREMLNEWEKTNPLWIKSMFTAMGNIAPSHM 248

Query: 256 ADFSLFDFKSIDKNSGVINGGDIGFDKEE 284
            D SLFDF       G    GD  FD+++
Sbjct: 249 LDRSLFDFTHFTPGPGKEASGDTLFDRDD 277