Pairwise Alignments

Query, 310 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 53.9 bits (128), Expect = 5e-12
 Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 7/192 (3%)

Query: 25  RNTGQAIADFNMIEDGDRIMVCLSGGKDSFT-MLDILMSLQKSAPISFELVAVNLDQKQP 83
           R   + I +  +    DRI+V LSGGKDS   ML++         +  +L          
Sbjct: 32  RQVERGIHEQKLFTHDDRILVALSGGKDSLALMLELSRQGYNVTGLHIDLAIPVSSPAAR 91

Query: 84  GFPEHVLPEYLESLGVEYKIVEEDTYAIVQDKVPEGKTTCALCSRLRRGILYRTAKELGA 143
           G  E      L  L +  K +  +  AI   K    +  C+ C +++R    +TA + G 
Sbjct: 92  GVVERFCA--LHGLPLIVKEMANEGLAIPAVKERLTRPICSACGKIKRYYFNKTAIDEGF 149

Query: 144 TKIALGHHRDDILETLFLN--MFYGGKMKGMPPKLVSDNGEHVVIRPLAYCREKDIIKYS 201
           T +A GH+ DD +  LF N   +    +    P L S++G    ++PL    E +   Y+
Sbjct: 150 TVLATGHNLDDEVARLFSNTLRWDAAYLSDQGPGLDSEDGFTRKVKPLWRLTEFETANYA 209

Query: 202 DMRG--YPIIPC 211
            + G  +   PC
Sbjct: 210 FLMGIEHHYAPC 221