Pairwise Alignments

Query, 310 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., tRNA 2-thiocytidine biosynthesis protein TtcA from Burkholderia phytofirmans PsJN

 Score =  389 bits (999), Expect = e-113
 Identities = 186/287 (64%), Positives = 228/287 (79%), Gaps = 3/287 (1%)

Query: 8   LTKAQQ---YNFNKLQKRIRRNTGQAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQ 64
           LT+ +Q   Y  NKL KR+ R  G+AI DFNMIE+GD++MVCLSGGKDS+ ML+ILM L+
Sbjct: 32  LTRREQKEAYENNKLFKRLARQVGEAIVDFNMIENGDKVMVCLSGGKDSYAMLEILMRLR 91

Query: 65  KSAPISFELVAVNLDQKQPGFPEHVLPEYLESLGVEYKIVEEDTYAIVQDKVPEGKTTCA 124
           + API+F++VAVNLDQKQPGFPEHVLPEYL+ L + + I  +DTY+IV+  VPEGKTTC+
Sbjct: 92  ERAPINFDIVAVNLDQKQPGFPEHVLPEYLKQLDIPFHIENQDTYSIVKRLVPEGKTTCS 151

Query: 125 LCSRLRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVSDNGEHV 184
           LCSRLRRGILYR A ELGATKIALGHHRDDIL+TL LNMFYGGK+KGMPPKL SD+G+++
Sbjct: 152 LCSRLRRGILYRVAGELGATKIALGHHRDDILQTLLLNMFYGGKLKGMPPKLQSDDGKNI 211

Query: 185 VIRPLAYCREKDIIKYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMF 244
           VIRPLAY +E D+ KY+++R +PIIPCNLCGSQPNL+R  +K ++ DW+KRFPGRIE MF
Sbjct: 212 VIRPLAYVKETDLEKYAELREFPIIPCNLCGSQPNLKRAEMKALVRDWEKRFPGRIENMF 271

Query: 245 RAMQNVVPSHLADFSLFDFKSIDKNSGVINGGDIGFDKEEIAPQVVE 291
            A+ NVVPSHL D  LF F  +         GDI FD+E  +    E
Sbjct: 272 NALSNVVPSHLMDHKLFPFAGLRATGEADPQGDIAFDEEPCSTDAAE 318