Pairwise Alignments

Query, 310 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., PP-loop domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  400 bits (1028), Expect = e-116
 Identities = 192/311 (61%), Positives = 243/311 (78%), Gaps = 12/311 (3%)

Query: 6   QELTKAQQYNFNKLQKRIRRNTGQAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQK 65
           +EL+K Q    NKLQKR+RR  G AIAD+NMIEDGDR+M CLSGGKDS+ MLDIL++LQ+
Sbjct: 15  EELSKKQITRLNKLQKRLRREVGSAIADYNMIEDGDRVMCCLSGGKDSYAMLDILLNLQQ 74

Query: 66  SAPISFELVAVNLDQKQPGFPEHVLPEYLESLGVEYKIVEEDTYAIVQDKVPEGKTTCAL 125
            AP+ FE++AVNLDQKQPGFPEHVLP YL+SL + Y I+E+DTY+IV++K+PEGKTTC+L
Sbjct: 75  RAPVQFEIIAVNLDQKQPGFPEHVLPAYLDSLNIPYHILEKDTYSIVKEKIPEGKTTCSL 134

Query: 126 CSRLRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVSDNGEHVV 185
           CSRLRRG LY  A+ +GATKIALGHHRDDI+ET+FLNMFYGGKMK MPPKL+SD+G +VV
Sbjct: 135 CSRLRRGTLYGFAQRIGATKIALGHHRDDIIETMFLNMFYGGKMKAMPPKLLSDDGANVV 194

Query: 186 IRPLAYCREKDIIKYSDMRGYPIIPCNLCGSQPNLQRQAVKQMLNDWDKRFPGRIETMFR 245
           IRPLAYCREKD+ +Y++++ +PIIPCNLCGSQ NL+RQAVK MLN WD+ +PGRIET+F 
Sbjct: 195 IRPLAYCREKDLEEYAELKKFPIIPCNLCGSQENLKRQAVKDMLNQWDRLYPGRIETIFT 254

Query: 246 AMQNVVPSHLADFSLFDFKSIDKNSGVINGGDI------GFDKEEIAPQVVEDEDLVMEF 299
           AMQN  PS   D   FDF S+ ++      GD+       FD  +IA          ++ 
Sbjct: 255 AMQNTAPSQGVDREQFDFVSLKRDPNAPMKGDVAEADLPAFDFLDIA------NSGHIDL 308

Query: 300 DPSLQLNVTNI 310
           D + ++N+ N+
Sbjct: 309 DAAKRINIVNV 319