Pairwise Alignments

Query, 281 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 65.9 bits (159), Expect = 8e-16
 Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 21/232 (9%)

Query: 27  SVEKALSGSYELKVGDVLKEAWGITVKHFINFTPAIFALILVQLAIFYFAFKLQIGDLSV 86
           S E  L+  YE + G  L   W I  ++   F   +  + L+ +A         +  L  
Sbjct: 8   SNEDLLNRDYEFRFGSYLSRGWAIFKQNLGLFIAYLIIVGLISIA---------LSSLDA 58

Query: 87  ILSVFQEGGAL---PEGLVQAMFIANFSYEVISAPIYAGISLMAMSHAAGLKTQTRHITK 143
                +EG  L   P G +Q          VI+ P+ AG  L+A       + +     +
Sbjct: 59  AFVADEEGTGLRFGPGGAIQL---------VINGPLSAGFFLVAFKTIKQQRVEFGDFFR 109

Query: 144 GLQFTIPVILATLFSLLLQGVAGMILPFLSMYLSVAFSNSLLLICEKKVPPMQSLLLSLR 203
           G    +P  L +L +  L  +  ++L    +YL++A+  +L L+ E+ + P  +L LS R
Sbjct: 110 GFNRFLPFFLTSLLTSALTLIGFVLLIVPGIYLAIAYVFALPLVAERNLEPWAALELSRR 169

Query: 204 AVNKKIFPLIAIYSILMVLFMMAVLLYGIGLVLFLPFFFHVKGIIYRNMFGI 255
            + KK         +L ++     L  GIGL+  +P+        Y ++ GI
Sbjct: 170 LITKKWLTFFGFLIVLGLINFAGALPCGIGLLFTIPWSICAITAAYEDIVGI 221