Pairwise Alignments

Query, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., ABC transporter, ATP-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  271 bits (693), Expect = 2e-77
 Identities = 134/262 (51%), Positives = 188/262 (71%), Gaps = 4/262 (1%)

Query: 18  IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77
           + +  + KS+ G  +  ++N +++ GEF+T+LGPSGCGK+T+LR IAG    D GQI+LD
Sbjct: 4   VSVQHLQKSYAGTPVFSDINCEIHKGEFVTLLGPSGCGKSTLLRCIAGLTAVDAGQIILD 63

Query: 78  DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137
            QD+  +  ++R +  VFQSYALFP+MTV +NVAFGLRMQKV  S+   RV+E LR+V L
Sbjct: 64  GQDIVPLSPQKRGIGMVFQSYALFPNMTVEQNVAFGLRMQKVDASDSHKRVLEILRLVEL 123

Query: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197
            + A R PHQLSGGQ QR+A+AR++V +P++LLLDE LSALD ++RK ++ +++Q+QR+L
Sbjct: 124 HDFAGRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQREL 183

Query: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQAT 257
           G+T IFVTHDQEEAL+MSDRI +M  GKI Q G    +Y  P ++F A FIG  N+  A 
Sbjct: 184 GLTTIFVTHDQEEALTMSDRIFLMNQGKIVQSGDAETLYTAPVDVFAAGFIGNYNLLDAD 243

Query: 258 TIDRIDEK----RIRVDIEGIE 275
           +  R+ ++    RI +  E IE
Sbjct: 244 SASRLLQRPVNGRIAIRPEAIE 265