Pairwise Alignments

Query, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit from Pseudomonas syringae pv. syringae B728a

 Score =  273 bits (698), Expect = 6e-78
 Identities = 152/349 (43%), Positives = 220/349 (63%), Gaps = 5/349 (1%)

Query: 17  VIRLSGISKSFDGKE-IIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQIL 75
           ++   G+ KS+DG+  I+ +LNLD+  GEFLT+LGPSG GKTT L M+AGFET   G+IL
Sbjct: 14  LVSFRGVQKSYDGEALIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEIL 73

Query: 76  LDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMV 135
           L  + +  VP  +R +  VFQ+YALFPHMTV EN+AF L ++ + ++++  +V +AL MV
Sbjct: 74  LGGRAINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVGEKVKKALGMV 133

Query: 136 RLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQR 195
           +L   A R P QLSGGQQQR+A+ARA+V +P+++L+DE L ALD +LR+ MQ E+K L +
Sbjct: 134 QLDTFAHRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQ 193

Query: 196 QLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQ 255
           +LG+T ++VTHDQ EAL+MSDR+ V   G+I+Q   PR +YE+PKN FVA FIGE N   
Sbjct: 194 RLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRSLYEEPKNTFVANFIGENNRLN 253

Query: 256 ATTIDRIDEKRIRVDIEGIESIVYYEDEV-KAGDKLQVLLRPEDLRIEEIKESEEKGIVG 314
              + + D  R  V++E  E +      V + G  + + +RPE + +    ES      G
Sbjct: 254 GRLVSQ-DGDRCVVELERGEKVHALAINVGQPGGPVTLSIRPERINLNGRSESCANRFSG 312

Query: 315 HVTDRTYKGMTLESVVELESGMCVMVSEFFNEDDPDVDHSIGQKVAVTW 363
            V +  Y G  +   +E+       V +   E DP +  S+G  V + W
Sbjct: 313 RVAEFIYLGDHVRVRLEVAGKHDFFVKQPIAELDPGL--SVGDVVPIGW 359