Pairwise Alignments

Query, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  289 bits (740), Expect = 8e-83
 Identities = 155/363 (42%), Positives = 230/363 (63%), Gaps = 4/363 (1%)

Query: 13  VGKPVIRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQG 72
           +G P+I +  + K F     +  ++LDV  GEFL +LG SGCGKTT+LRM+AGFE    G
Sbjct: 26  LGPPIIEIETVVKKFGDFTAVAGVSLDVFEGEFLCLLGGSGCGKTTLLRMMAGFEQPTSG 85

Query: 73  QILLDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEAL 132
           +IL+D +D+T VP   R VN +FQSYALFPHM+V +N+AFGL+   +P++E E RV E L
Sbjct: 86  RILIDGRDMTGVPPYDRPVNMMFQSYALFPHMSVEQNIAFGLKQDGMPKAEREARVAEML 145

Query: 133 RMVRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQ 192
            +V+L   A+RKPHQLSGGQ+QR+A+AR++   P+VLLLDE LSALD KLR++ Q +L  
Sbjct: 146 SLVQLERFAKRKPHQLSGGQRQRVALARSLAKHPRVLLLDEPLSALDKKLRERTQLDLVN 205

Query: 193 LQRQLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEIN 252
           +Q + GITF+ VTHDQEEA++M+DR+ +M  G I Q  +P+ +YE P   FVA F G +N
Sbjct: 206 IQEKTGITFVVVTHDQEEAMTMADRVAIMDEGWIVQIDAPQSMYEYPNTRFVAEFFGSVN 265

Query: 253 VFQATTIDRIDEKRIRVDIEGIESIVYYEDEVKA--GDKLQVLLRPEDLR-IEEIKESEE 309
           +F+   ++  +   + ++   +E+ +Y    V    G  +   LRPE +  + E  +   
Sbjct: 266 MFEGVLVED-EPDHVMIEAPELENPIYVGHGVSGHEGATVWAALRPEKVTLVTEKPDRPY 324

Query: 310 KGIVGHVTDRTYKGMTLESVVELESGMCVMVSEFFNEDDPDVDHSIGQKVAVTWVESWEV 369
               G V D  Y G T   +V L++G  + V+   +E D + + + G +V V+W  +  V
Sbjct: 325 NWAAGEVKDIVYLGSTSTYIVGLDTGKRMRVTVANHERDVEWEITWGDRVYVSWAATSAV 384

Query: 370 VLN 372
           V++
Sbjct: 385 VVS 387