Pairwise Alignments

Query, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  270 bits (690), Expect = 5e-77
 Identities = 137/278 (49%), Positives = 192/278 (69%), Gaps = 4/278 (1%)

Query: 20  LSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLDDQ 79
           L  + K+F    ++ +  L V  GEF++ LGPSGCGKTTVLRMI GFET   G+IL+D Q
Sbjct: 19  LKDLHKAFGAARVVSDFTLAVERGEFVSFLGPSGCGKTTVLRMIGGFETPSSGRILIDGQ 78

Query: 80  DVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRLAE 139
           DVT +   +R V  VFQ+YALFP++TV ENVAFGL++ + P S+   RV E L +++L +
Sbjct: 79  DVTALTPARRKVGMVFQAYALFPNLTVAENVAFGLKVAREPASQTARRVDEMLELIKLPQ 138

Query: 140 MAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQLGI 199
           +  R P+QLSGGQQQR+A+ARA+  +PK+LLLDE LSALD K+R  ++ E++ +QR+LGI
Sbjct: 139 LKDRYPYQLSGGQQQRVALARALAVRPKILLLDEPLSALDAKIRVSLREEIRAVQRELGI 198

Query: 200 TFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQATTI 259
           T +FVTHDQEEALSMSDR++VM +G+ +Q G+P EIY  PK  FVA F+G +N+ +    
Sbjct: 199 TTVFVTHDQEEALSMSDRVVVMHNGRADQVGAPFEIYNAPKTRFVASFVGTLNLLEGVA- 257

Query: 260 DRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPE 297
             +   R+ ++ +GI +          G  + + LRPE
Sbjct: 258 --LAPDRLTIEGQGITTTRGLAG-AAVGATVSLALRPE 292