Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., putrescine/spermidine ABC transporter permease from Azospirillum brasilense Sp245

 Score =  196 bits (498), Expect = 5e-55
 Identities = 106/283 (37%), Positives = 162/283 (57%), Gaps = 19/283 (6%)

Query: 9   QNAIVTLIVGWLVLFVLIPNLMIIGTS----------------FLTRDEANLIKFAF--T 50
           +  +V +   WL+LF L+P L++ G S                +L  ++A   K      
Sbjct: 13  RGVVVAIPYLWLLLFFLVPFLIVFGISLSEAMLAQPPYAPLIDWLVDEDAGTTKLQILLN 72

Query: 51  FENYTRLL-DPLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVP 109
             NY RL  D LY    L+S  +A+V T+ CL++GYP AY +A+     R  ++ L+I+P
Sbjct: 73  LSNYLRLGGDDLYILAYLNSVKIALVTTVCCLLLGYPMAYAIARAEPSRRGPLMMLVILP 132

Query: 110 FWTNSLIRTYGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILP 169
           FWT+ LIR Y    +L   G+++  L   GL   P  +++++ AV IG+ Y  LPFM+LP
Sbjct: 133 FWTSFLIRIYAWIGILKANGVVDNLLQWTGLTTEPFELLYSDWAVYIGMTYCYLPFMVLP 192

Query: 170 LYSAIEKLDGTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLL 229
           LY+ +EKLD T +EAA DLG   ++  + V LPL++PGII G LLV +P++G F   +LL
Sbjct: 193 LYATLEKLDPTLLEAAADLGCRPWKAFLTVTLPLSLPGIIAGSLLVFIPSVGEFVTPELL 252

Query: 230 GGAKNLLIGNVIKSQVLNARDWPFGAATSIALTLAMAIMLYAY 272
           GG   L+IG V+ ++    RDWP  +A +IAL L + + +  +
Sbjct: 253 GGPDTLMIGRVLWNEFFANRDWPVASAVAIALLLFLVVPIMVF 295