Pairwise Alignments

Query, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  209 bits (533), Expect = 5e-59
 Identities = 113/284 (39%), Positives = 167/284 (58%), Gaps = 13/284 (4%)

Query: 5   KLNLQNAIVTLIVGWLVLFVLIPNLMIIGTSFLTRDEA------------NLIKFAFTFE 52
           K N +  ++ +   WL LF  +P L+++  SF   D A              ++    F 
Sbjct: 14  KPNGRQMVIGVPFLWLFLFFALPFLIVLKISFAEADVAIPPYTEIFSYADEKLQMVLNFA 73

Query: 53  NYTRLL-DPLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFW 111
           NYT L  D LY    L S  MA ++TL+CL+IGYP AY +A   +  +  +L LI++P W
Sbjct: 74  NYTLLSGDDLYVSAYLGSLKMAFISTLLCLLIGYPMAYAIASARKDLQTVLLLLIMMPTW 133

Query: 112 TNSLIRTYGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLY 171
           T  LIR Y    +L   G+LN  LM LGLIDAPL+I+ T  AV IG+VY  LPFMILPLY
Sbjct: 134 TAILIRVYAWMGILSNNGLLNAFLMWLGLIDAPLQILNTNLAVYIGVVYSYLPFMILPLY 193

Query: 172 SAIEKLDGTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGG 231
           + + K D + +EAA DLG++ F +  ++ +PL+  G+I GC+LV +P +G F I +LLGG
Sbjct: 194 ANLVKHDTSLLEAASDLGSSTFNSFWKITVPLSKNGVIAGCMLVFIPVVGEFVIPELLGG 253

Query: 232 AKNLLIGNVIKSQVLNARDWPFGAATSIALTLAMAIMLYAYYRA 275
            + L+IG V+  +  N RDWP  +A ++ + L + + +  + R+
Sbjct: 254 PETLMIGRVLWQEFFNNRDWPVASALAVIMLLVLIVPIILFNRS 297